Amycolatopsis sp. YIM 10: YIM_11310
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Entry
YIM_11310 CDS
T06270
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
amyy03060
Protein export
amyy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
YIM_11310 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
YIM_11310 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_11310 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amyy02044
]
YIM_11310 (ffh)
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
YIM_11310 (ffh)
Secretion system [BR:
amyy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
YIM_11310 (ffh)
Eukaryotic Sec-SRP protein
YIM_11310 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
nSTAND3
cobW
AAA_31
ArsA_ATPase
TctA
Zeta_toxin
APS_kinase
NPHP3_N
MMR_HSR1
AAA_30
MobB
nSTAND_NTPase7
ParA
Thymidylate_kin
AAA_16
AAA_33
ABC_tran
TsaE
AAA_18
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
QFU87464
UniProt:
A0A5P9PHG6
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All DBs
Position
2278238..2279797
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AA seq
519 aa
AA seq
DB search
MFDTLSDRLTSVLQNLRGKGKLSDADIDATAREIRIALLEADVALPVVRAFIAKVKERAK
GAEVSEALNPAQQVIKIVNEELVAILGGETRRLNLAKNPPTVLMLAGLQGAGKTTLAGKL
AMWLKKQGHAPLLVACDLQRPNAVTQLQVVGERAGVPTFAPEPGNGVGDPVDVARRGIDE
AKHNQHDIVIVDTAGRLGVDEELMRQAADIRDAVQPDETLFVVDAMIGQDAVTTAEAFRD
GVGFTGVVLTKLDGDARGGAALSVREVTGQPILFASNGEKLEDFDLFHPDRMASRILGMG
DMLTLIEQAEQAFDQEKAEQAAQKLGSGELTLEDFLEQMLAVRKMGPIGNLLGMLPGAGQ
MKDQLAQVDDKSLDRLQAIIRGMTPAERADPKIINASRRQRIAKGSGVAVREVNDLVNRF
YDAKKMMQQMAGRFGFGGGGANNRKNNRKGKKGKKGKGRGPTQPKIKGGFPGGMPALPPG
GFPGAGPAGGMPDLSQLGGSLNDLPPGFDPSKFKLPKGK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgacaccctctccgatcgcctcacttcggtcctgcagaacctgcgtggcaagggg
aagctctccgacgccgacatcgacgccaccgcgcgggagatccgcatcgcgctgctggag
gccgacgtcgcgctcccggtggtgcgcgcgttcatcgccaaggtcaaggaacgggccaag
ggcgccgaggtctccgaggcgctgaaccccgcccagcaggtcatcaagatcgtcaacgag
gaactggtcgccatcctcggcggcgagacccggcggctgaacctggcgaagaacccgccg
accgtgctgatgctcgccggtctgcagggtgccggtaagaccacgctggcgggcaagctg
gcgatgtggctgaagaagcagggccacgcgccgctgctggtcgcctgcgacctccagcgc
cccaacgcggtcacccagctgcaggtggtcggtgagcgcgcgggcgtgccgaccttcgcg
ccggagccgggcaacggcgtcggcgacccggtcgacgtcgcccgccgcggtatcgacgag
gccaagcacaaccagcacgacatcgtgatcgtcgacaccgcgggccgcctcggtgtggac
gaggagctgatgcggcaggccgccgacatccgcgacgcggtccagccggacgagacgctc
ttcgtggtcgacgcgatgatcggccaggacgcggtgaccaccgccgaagccttccgcgac
ggcgtcggcttcaccggcgtggtgctcaccaagctcgacggcgacgcgcgcggtggtgcc
gcgctgagcgtgcgcgaggtcaccggccagccgatcctgttcgcgtcgaacggcgagaag
ctcgaggacttcgacctgttccacccggaccggatggccagccggatcctcggcatgggc
gacatgctcaccctgatcgagcaggccgagcaggccttcgaccaggagaaggcggagcag
gccgcgcagaagctgggcagcggcgagctgaccctggaggacttcctcgagcagatgctc
gcggtgcgcaagatgggcccgatcggcaacctgctgggcatgctgcccggcgccgggcag
atgaaggaccagctggcccaggtcgacgacaagtcgctggaccggctgcaggcgatcatc
cgcggcatgaccccggccgagcgggccgatccgaagatcatcaacgcctcccggcgccag
cgcatcgccaagggctccggtgtggccgtgcgcgaggtcaacgacctggtcaaccggttc
tacgacgccaagaagatgatgcagcagatggccgggcggttcggcttcggtggcggtggc
gcgaacaaccggaagaacaaccgcaagggcaagaaggggaagaagggcaaggggcgcggc
cccacgcagcccaagatcaagggcggtttccccggtggcatgcccgcgctgccgccgggt
ggcttccccggcgccggtcccgccggtggcatgcccgacctgtcgcagctcggtggcagc
ctgaacgatctgccccccggtttcgacccgtcgaagttcaagctgcccaagggaaagtag
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