Amycolatopsis sp. YIM 10: YIM_11840
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Entry
YIM_11840 CDS
T06270
Name
(GenBank) RIO1 family protein
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
YIM_11840
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
amyy01001
]
YIM_11840
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyy03009
]
YIM_11840
Enzymes [BR:
amyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
YIM_11840
Protein kinases [BR:
amyy01001
]
Serine/threonine kinases: Other
RIO family [OT]
YIM_11840
Ribosome biogenesis [BR:
amyy03009
]
Eukaryotic type
Pre-40S particles
Kinases
YIM_11840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Kdo
Pkinase
APH
TCAD9
PK_Tyr_Ser-Thr
Motif
Other DBs
NCBI-ProteinID:
QFU87561
UniProt:
A0A5P9PGX4
LinkDB
All DBs
Position
complement(2422503..2423456)
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AA seq
317 aa
AA seq
DB search
MRKHDLDFERLENTPARRKSRRARFDDEPEPSRRGRLTEEERVRLAHQRADAYTETAIPG
GGDRWSTWADGEQGPHPRPSWVITQLAAVDTELGVLKTGKEADVHLLRRGLSDGPQSLLA
AKRYRSNEHRMFHRDAGYLEGRRMRRSREMRAIETRTAFGRNLIAEQWAVAEFAALSRLW
GAGVPVPYPVQRSGTELLLEFIGEEDGTAAPRLAQVRTDEDGLRDLWYQLVSALETMAAH
GLAHGDLSAYNLMVHRDRLVLIDLPQVVDIVANPRGLEFLARDVHNVASWFAARGLPPEV
LDPEALVGELRQAAGLP
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaagcacgacctcgatttcgaacgcctggaaaacacgccggcacgccgcaagagc
cggcgtgcccgcttcgacgacgaacccgaaccgagccgccgcgggcggctcaccgaagaa
gaacgcgtccggctcgcccaccagcgcgccgacgcctacaccgaaaccgcgatccccggc
ggcggcgaccgctggtccacctgggccgacggtgagcagggcccgcacccgcggcccagc
tgggtgatcacccaactggccgcggtggacaccgagctgggggtgctcaagaccggtaag
gaggccgacgtccacctgctgcggcgcgggctgtcggacggcccgcagtcgctgctggcc
gccaagcggtaccgcagcaacgaacaccggatgttccaccgcgacgccggctacctggaa
ggccgccggatgcggcggtcgcgggagatgcgggcgatcgagacccgcaccgccttcggc
cgcaacctgatcgccgagcagtgggcggtcgccgagttcgccgcgctgtcccggctctgg
ggcgcgggcgtgccggtgccgtacccggtccagcgcagcggtaccgagctgctgctggag
ttcatcggcgaggaggacggcacggccgcaccacggctggcgcaggtgcgcacggacgag
gacggcctgcgtgacctctggtaccagctggtgtccgcgctggagacgatggcggcgcac
gggctggcacacggcgacctgtccgcgtacaacctgatggtccaccgcgaccggctggtg
ctgatcgacctgccgcaggtggtggacatcgtggccaatccgcgcggtctggagttcctg
gccagggacgtgcacaacgtggcgagctggttcgccgcgcggggcctgccaccggaggtg
ctcgacccggaagccctggtcggcgagctgcgccaggcggcgggactgccctga
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