Amycolatopsis sp. YIM 10: YIM_14235
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Entry
YIM_14235 CDS
T06270
Symbol
gabD2
Name
(GenBank) Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00250
Alanine, aspartate and glutamate metabolism
amyy00310
Lysine degradation
amyy00350
Tyrosine metabolism
amyy00650
Butanoate metabolism
amyy00760
Nicotinate and nicotinamide metabolism
amyy01100
Metabolic pathways
amyy01120
Microbial metabolism in diverse environments
Module
amyy_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
YIM_14235 (gabD2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
YIM_14235 (gabD2)
00310 Lysine degradation
YIM_14235 (gabD2)
00350 Tyrosine metabolism
YIM_14235 (gabD2)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
YIM_14235 (gabD2)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
YIM_14235 (gabD2)
1.2.1.20 glutarate-semialdehyde dehydrogenase
YIM_14235 (gabD2)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
YIM_14235 (gabD2)
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Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
QFU88033
UniProt:
A0A5P9PII9
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Position
complement(2882965..2884575)
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AA seq
536 aa
AA seq
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MTSTTPAPTGQQSSRPSTVGGVVGAPSAARAAQLVRRATGGADRAPAEITSPFTGLITAA
LPQADDTEARAAFAAARSAQGAWAAVPVTERQRILIRLHDLLLERQDEVLDLVQVEAGKA
RMDAFDEVSGSALVAAYYGKHSARILSPRRAAGVIPVLTKAGEIRHPKGVIGVITPWNYP
LALTAMDVLPALAAGNTVVQKPDNQTALSALWLHELAEEAGLPAGVWQIVLGRGSAIGDA
LVEESDYLCFTGSTPTGKRLAEQVAGRLTGYSLELGGKNPMIVLPDANPAKAAAGAVTAC
FSSAGQLCVSVERIYVHESIREEFTRAFVAKTEALRLGAKLDHSADMGSLTSESQLATVS
AHVDDARANGATVLTGGHPRPDVGPLFYAPTVLTDVTPAAKLFAEETFGPVVSIYGYTEI
DDAVDRANDTVYGLNASVWCRDTRAGAAVAARLKAGTVNVNESYAATFGSVGVPMGGMKE
SGFGRRNGAEGLLKYTEAQSIAVQRGLKLRPFRGLPPKLWVKSMTSSMKALRRLPR
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaccacgccagcgcccaccggtcagcagtcttcccggccgagcaccgtgggc
ggcgtggtcggcgcgccttcggccgcgcgggcggcccagctggtccgccgcgccaccggc
ggcgcggaccgggcgcccgccgagatcacctcgccgttcaccggcctgatcaccgcggcg
ctgccccaggcggacgacaccgaggcccgcgccgccttcgccgcggcccggagcgcgcag
ggcgcctgggcggcggtgccggtgaccgagcgccagcgcatcctcatccgcctgcacgac
ctgctgctcgaacgccaggacgaggtgctcgacctggtccaggtcgaggcgggcaaggca
aggatggacgccttcgacgaggtcagcggctcggcgctggtcgccgcctactacggcaag
cacagcgcgcgcatcctctccccgcgccgcgccgccggggtgatcccggtgctcaccaag
gcgggcgagatccgccaccccaagggcgtgatcggcgtgatcaccccgtggaactacccg
ctcgcgctgaccgcgatggacgtgctgcccgcgctggcggcgggcaacaccgtggtgcag
aagccggacaaccagaccgcgctgtccgcgctctggctgcacgaactcgccgaggaggcc
ggactgcccgccggggtgtggcagatcgtgctcggccggggttcggcgatcggcgacgcg
ctggtcgaggagtccgactacctctgcttcaccgggtccacgccgaccggcaagcggctg
gccgagcaggtcgccgggcggctgaccgggtactcgctcgaactcggcggcaagaacccg
atgatcgtgctgccggacgcgaacccggccaaggccgccgccggcgcggtcaccgcctgc
ttctcctcggccgggcagctgtgtgtctcggtcgagcggatctacgtccacgaaagcatt
cgcgaggagttcaccagggccttcgtggcgaagaccgaggcgttgcggctcggcgcgaag
ctcgaccactccgccgacatgggctcgctgacctcggaaagccagctggccaccgtctcg
gcgcacgtcgacgacgcgcgggccaacggcgcgaccgtgctcaccggcgggcatccccgg
cccgacgtcggcccgctgttctacgcgccgaccgtgctcaccgacgtcaccccggccgcg
aagctgttcgccgaggagaccttcggcccggtggtgtcgatctacggctacaccgagatc
gacgacgcggtggaccgcgcgaacgacaccgtctacggcctcaacgcgagcgtgtggtgc
cgcgacacccgcgcgggcgcggccgtggcggcgcggctgaaggcgggcacggtcaacgtg
aacgagagctacgcggccaccttcggcagcgtcggcgtgccgatgggcgggatgaaggag
tccggcttcggccgtcgcaacggggccgaagggctgctcaagtacaccgaggcgcagtcg
atcgcggtgcagcgcgggctgaagctgcgcccgttccgcggcctgccgccgaagctctgg
gtgaagagcatgacttcgagcatgaaagccttgcggcgcctgccccgctga
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