Amycolatopsis sp. YIM 10: YIM_16235
Help
Entry
YIM_16235 CDS
T06270
Symbol
pelA1
Name
(GenBank) Pectate lyase A precursor
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00040
Pentose and glucuronate interconversions
amyy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
YIM_16235 (pelA1)
Enzymes [BR:
amyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
YIM_16235 (pelA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-ProteinID:
QFU88427
UniProt:
A0A5P9PKN5
LinkDB
All DBs
Position
3291009..3291800
Genome browser
AA seq
263 aa
AA seq
DB search
MRGNGKKLTTLIAGLLLASGLVWPMATAPTATASPAAPAWPTPTGQVSVNGTISVPASGL
DGGMRRYCCIGDGGQEEDQDPMFLLAPGATLQNVIIGGPAGDGVHCSGPCTLRNVWWEDV
GEDAATFRGSGDPAFLVDGGGARSAGDKVFQHNGPGTLTVQGFQASNFGTFYRSCGNCST
QHQRDLVIRDVTLTRPGNRVAGINTNYGDTARFSGLTIVNDPDRKMVICQKYIGNDDGDE
PDENGSGPDSTHCRYSAGDISYQ
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcggaaacggaaagaaactgacaacactcatcgcgggcctgctgctcgcctcgggc
ctggtctggccgatggccacggcgccgacggccacggcctcaccggcagccccggcctgg
ccgacaccgaccgggcaggtcagcgtgaacggcacgatctcggtcccggccagtggcctg
gacggaggcatgcgccggtactgctgcatcggcgacggtggccaggaggaagaccaggac
ccgatgttcctgctcgctcccggcgcgacgctgcagaacgtgatcatcggcggcccggcc
ggcgacggcgtgcactgctcgggtccctgcacgctgcgcaacgtgtggtgggaggacgtc
ggtgaggacgccgcgaccttccgcggcagcggtgacccggccttcctggtcgacggcggt
ggcgcgcgttcggccggggacaaggtgttccagcacaacgggcccggcacgctgaccgtg
cagggcttccaggccagcaacttcggcacgttctaccgctcgtgcggaaactgctccacc
cagcatcagcgcgacctggtgatccgggacgtgacgctgacccggcccggcaaccgggtc
gccgggatcaacaccaactacggcgacacggccaggttcagcgggctcaccatcgtcaac
gatcccgaccggaagatggtgatctgccagaagtacatcggcaacgacgacggggacgag
cccgacgagaacggttccggccccgacagcacccattgccggtattccgccggcgacatc
agttaccaatga
DBGET
integrated database retrieval system
