Amycolatopsis sp. YIM 10: YIM_17360
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Entry
YIM_17360 CDS
T06270
Symbol
pdxS
Name
(GenBank) Pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00750
Vitamin B6 metabolism
amyy01100
Metabolic pathways
amyy01240
Biosynthesis of cofactors
Module
amyy_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
YIM_17360 (pdxS)
Enzymes [BR:
amyy01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
YIM_17360 (pdxS)
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Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
Glu_synthase
DHO_dh
TetR_C_27
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
QFU88652
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Position
3544684..3545595
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AA seq
303 aa
AA seq
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MSDVATSSPSPETGTARVKRGMAEMLKGGVIMDVVTAEQAKIAEDAGAVAVMALERVPAD
IRAQGGVARMSDPDLIDGIVEAVSIPVMAKARIGHFVEARVLQSLGVDYIDESEVLTPAD
YANHIDKWAFTVPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNATTHMRKIRGEL
RRLSSLPEDELFVAAKELQAPYELVKEVAAKGKLPVVLFTAGGIATPADAAMMMQLGAEG
VFVGSGIFKSGNPARRAEAIVKATTFHDDPDMLAKVSRGLGEAMVGINVDDVPEPHRLAE
RGW
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacgtcgccaccagttccccttcgcccgaaaccggcaccgcccgcgtcaagcgc
ggcatggccgagatgctcaagggcggcgtgatcatggatgtggtcaccgccgagcaggcc
aagatcgccgaggacgccggcgcggtcgcggtgatggcgctcgagcgcgtcccggccgac
atccgcgcgcagggcggcgtggccaggatgagcgaccccgacctgatcgacggcatcgtc
gaggcggtgtccatcccggtgatggccaaggcgaggatcggccacttcgtcgaggcgcgg
gtgctgcagtcgctcggggtcgactacatcgacgagtccgaggtgctcaccccggccgac
tacgccaaccacatcgacaagtgggcgttcaccgtgccgttcgtctgcggtgcgacgaac
ctgggcgaggcgctgcgccggatcaacgagggcgcggcgatgatccgctccaagggcgag
gccggcaccggcgacgtgtccaacgcgaccacgcacatgcgcaagatccgcggcgaactg
cgccggctgtcgtcgctgccggaggacgagctttttgtcgccgccaaggaacttcaggcg
ccctacgagctggtgaaggaggtcgcggcgaagggcaagctgccggtggtgctgttcacc
gcgggcggcatcgccacccccgccgacgcggcgatgatgatgcaactcggcgccgagggc
gtttttgtcggctcgggcatcttcaagtcgggcaacccggcgcgccgggccgaggcgatc
gtgaaggccaccaccttccacgacgacccggacatgctggcgaaggtttcgcgcggtctc
ggcgaagcgatggtcggcatcaacgtcgacgacgtgcccgagccgcaccgccttgccgag
cgcggctggtag
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