Amycolatopsis sp. YIM 10: YIM_18835
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Entry
YIM_18835 CDS
T06270
Symbol
gadC
Name
(GenBank) Glutamate/gamma-aminobutyrate antiporter
KO
K20265
glutamate:GABA antiporter
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_18835 (gadC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_18835 (gadC)
Transporters [BR:
amyy02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
YIM_18835 (gadC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AA_permease_2
AA_permease
UL2
Motif
Other DBs
NCBI-ProteinID:
QFU88947
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Position
3861589..3862716
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AA seq
375 aa
AA seq
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MTIFYYPSLLGYVASTLAYVFDPGLASNGLWTATVIVVAYWSGVWISSRGTKGVAGLASG
GLIVGTLVPGVVLVTLGFVFLGQGNAPAAPMNAGELLPEWAGLASLVLIVNNFLSYSGME
MNAVHVSSLRDPAKQFPKSMFLAMGLVLLIFILPALAISWVVPTGELSLTAGVMQAFDAV
FAQFGWQLLTPVFGVMLVTASLGGMLTWLAGPSKGLLLISRKEGYLPPVLQKRNKYGVQQ
NILVAQGSVTTAIALLYALIPDVSSAYWIFSVITTQVYLITYLLLFVAAVRLRRKEPDHP
RGYRAPLLTGLCGVGFTASLAALLVGFIPPSQFGSGNTAGYVLIVGGGAIGLGLVVPFLF
YRFRKPSWRQPEEES
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcttctactacccgagcctgctcggctacgtcgcgagcaccctcgcctacgtc
ttcgatcccggtttggcgagcaacgggctctggaccgcgacggtgatcgtggtcgcctac
tggtcgggggtctggatctcttcgcgcggcaccaagggcgtcgccgggctggcgagcggt
ggcctgatcgtcggcacgctcgtgcccggcgtcgtcctggtcacgctcggcttcgtgttc
ctggggcagggcaacgccccggccgcgccgatgaacgcgggcgaactgctgcccgaatgg
gcgggcctggccagcctggtgctgatcgtgaacaacttcctttcgtactccgggatggag
atgaacgcggtgcacgtctcgtcgctgcgtgatccggcgaagcagttcccgaagtcgatg
ttcctggcgatgggcctggtactgctgatcttcatcctgcccgcgctggcgatcagctgg
gtggtgcccaccggcgaactctcgctcaccgcgggggtgatgcaggccttcgacgccgtg
ttcgcccagttcggctggcagctcctcaccccggtgttcggcgtcatgctggtgaccgcc
tcgctgggcgggatgctgacgtggctagccgggccgtcgaaggggctgctgctcatctcc
cgcaaggagggctacctcccgccggtgctgcagaagcggaacaagtacggcgtccagcag
aacatcctggtggcacagggttcggtcaccaccgcgatcgcgctgctgtacgcgctcatc
ccggacgtctcgagcgcgtactggatcttctcggtgatcaccacgcaggtgtacctgatc
acctacctgctgctgttcgtggccgcggtccggttgcgccgcaaggaacccgaccacccg
agggggtaccgcgcgcccctgctcaccggcttgtgcggagtcggtttcaccgcttcgctg
gccgcgctgctcgtcggcttcatcccgccgtcgcagttcggctccggcaacaccgccggg
tacgtcctgatcgtcggcggcggcgcgatcggactcgggctggtggtcccgttcctgttc
taccgcttccgcaaaccgtcgtggcggcagccggaggaggagtcatga
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