Amycolatopsis sp. YIM 10: YIM_20135
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Entry
YIM_20135 CDS
T06270
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_20135
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_20135
Transporters [BR:
amyy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YIM_20135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
Zeta_toxin
DUF87
AAA_23
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QFU89206
UniProt:
A0A5P9PLQ0
LinkDB
All DBs
Position
complement(4140567..4142300)
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AA seq
577 aa
AA seq
DB search
MLSRLLRGHLRPYRRELAWVVLLQLVGTMGSLYLPSLNADIIDQGVATGDTGYILRTGGW
MLAVTLLQIVCSTGAVYLGARVAMSFGRDVRASIFHRAGAFSAREVSGFGAASLITRNTN
DVQQVQMLVVVACTMLVTAPIMSVGGIVLAIREDAGLSWLMLVAVPVLLVAMGLIIVRMV
PRFRTMQDRIDTVNRVLREQLSGIRVVRAFVREPVETRRFAEANSALTDTALRVGRLQAL
LFPIVMLVLNASSVAVVWFGAHRVAEGQLQVGAMVAFLSYLMLILTSVMMVTFIATMIPR
ASVCAERIVEVLDTESSVLPPENPVREVTARGEVEFRDVELRYPGAADPVLRGVSFRAEP
GKTTAIVGSTGAGKTTLVSLIPRLLDVTGGSLLVNGVDVRRLDPALLRGRIGLVPQRPYL
FTGTVASNLRYGNPAATDEELWEALEIAQAREFVEAMKGGLDAPITQGGTNVSGGQRQRL
SIARALVRKPEIYLFDDSFSALDLATDAALRAALRPHTADAAVLVVAQRVSTVVDAEQIV
VLENGSVVGIGTHTELMANCPTYLEIVQSQLTPEPAA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgctgagtcgcctgctgcgcggtcacctgcggccgtaccggcgcgaactggcctgggtg
gtgctgctgcagctggtcggcacgatgggctcgctgtacctgccgagcctgaacgccgac
atcatcgaccagggcgtggccaccggtgacaccgggtacatcctgcgcaccggcggctgg
atgctcgcggtcacgctgctgcagatcgtgtgctcgaccggcgcggtctacctcggcgcg
cgggtcgcgatgagcttcggccgcgacgtgcgcgcgtcgatcttccaccgcgcgggcgcg
ttctccgccagggaggtctccggcttcggcgccgcctcgctgatcacccgcaacaccaac
gacgtgcagcaggtgcagatgctggtggtggtggcctgcacgatgctggtcaccgcgccg
atcatgtccgtcggcggcatcgtgctggccattcgcgaggacgccgggctgtcgtggctg
atgctggtcgcggtaccggtgctgctggtggcgatgggcctgatcatcgtccgcatggtg
ccgcgcttccgcaccatgcaggaccgcatcgacacggtgaaccgcgtgctgcgcgagcag
ctctccggcatccgcgtggtccgcgccttcgtccgcgaaccggtggagactcgccgcttc
gccgaggccaactccgcgctgaccgacaccgcgctgcgcgtcgggcggctgcaggcgctg
ctgttcccgatcgtgatgctggtgctcaacgcctccagcgtggccgtggtctggttcggc
gcgcaccgggtcgccgagggacagctgcaggtcggcgcgatggtcgcgttcctgagctac
ctgatgctgatcctcacctcggtgatgatggtgaccttcatcgcgacgatgatcccgcgc
gcgtcggtctgcgccgagcgcatcgtcgaggtgctggacaccgaatcctcggtgctacca
ccggaaaacccggtccgggaggtgaccgcccgcggtgaggtggagttccgcgacgtcgaa
ctgcgctaccccggtgccgcggatccggtgctgcgcggggtttccttccgcgcggagccg
ggcaaaaccaccgcgatcgtgggcagcacgggcgccgggaagaccacgctggtctcgctg
atcccccgcctgctcgacgtcaccggcggcagcctgctggtcaacggcgtggacgtgcgg
cggctcgaccccgcgctgctgcgtggccggatcgggctggtgccgcagcggccgtacctg
ttcaccggcaccgtggcgagcaacctgcgttacgggaatccggcggccaccgacgaagaa
ctgtgggaggcactggaaatcgcgcaggcccgcgagttcgtcgaagcgatgaagggcggt
ctcgacgcgccgatcacccagggcggcacgaacgtctccggcgggcagcgccagcggctc
tccatcgcccgcgcgctggtgcgcaaaccggagatctacctgttcgacgactcgttctcc
gcgctcgacctggccaccgacgccgccctgcgcgcggcgctgcggccgcacaccgccgac
gccgcggtgctggtggtcgcccagcgggtgtccactgtggtcgatgccgagcagatcgtg
gtgctggagaacggttccgtggtcggaatcggcacgcacaccgagctgatggcgaactgc
cccacctatctcgagatcgtccagtcccagctgaccccggagcccgcggcatga
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