Amycolatopsis sp. YIM 10: YIM_23240
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Entry
YIM_23240 CDS
T06270
Symbol
ddpC6
Name
(GenBank) putative D,D-dipeptide transport system permease protein DdpC
KO
K02033
peptide/nickel transport system permease protein
K02034
peptide/nickel transport system permease protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_23240 (ddpC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_23240 (ddpC6)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_23240 (ddpC6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
QFU89825
UniProt:
A0A5P9PP72
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Position
complement(4826449..4828134)
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AA seq
561 aa
AA seq
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MLAAVAFLPWLSGTDPALTVLRARSADQAPTPEQLTAVREQLGLDRGPLPHLLHWLGGLP
RGDAGTSWVSGTPVLPEVMNALGVSVTLMLATLVVTIAVAALVSTRTLHLGARRLLREHR
TGTGAALLAALPKFLLASLLATVFGVWLGWFPPGGWTGPASMVLPALALGVPSGAVIGGL
LEHALPATFGEPWVRTWHAAGFPPGRIARPALRRALAGVLPQLVPSVVSLVGGAVAVEKI
FNIPGLGRLALDSALAQDLPPLQTATLLLALLGVAAGLLIKTVRRGLLGPALRGGELAAA
PAPALRRRRSTGRLFGACALTLCTIVLIGLFRDPSQVDTAARLLPPSLTHPLGTDALGRD
MLARLGHGALRTAGVALAVTAVSAVLGVLLGMAGQAAAGLTEVVSTLPAVLAGLLTTAVT
GPSVWGAACAVCLVGWTPYAAQTAALLEQERATGYLRASISFGAGPAHLLRHHLLPAVLP
AVVRNALLRLPTTVLVLASLGFLGLGEQPPTPEWGRLLSENQPYLELSPWTTLGPAGALI
LLSVLAAAGSPVHRNTRRTPC
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcggccgtcgctttcctgccgtggctgtccgggaccgaccccgcgctgacggtc
ctgcgtgcccgctccgccgaccaggcccccactcccgagcagctgaccgcggtacgcgaa
cagctgggcctggaccggggtccgctcccccacctcctgcactggctcggcggattgccc
cgcggagacgcgggcacgtcctgggtgtcgggcaccccggtcctgccggaggtgatgaac
gcgctgggggtctccgtcacgctgatgctggccacgctcgtggtcaccatcgcggtggcc
gcgctggtcagcacccgcaccctgcacctcggcgccaggcggctgctgcgagaacaccgc
acgggcacgggagccgcgttgctcgccgcgctgcccaagttcctgctcgcctcgctgctc
gccaccgtgttcggcgtgtggctgggctggttcccgcccggcggctggaccgggccggcg
tcgatggtgctgcccgcgctcgctctcggggtgccctccggagcggtgatcggcggcctg
ctcgagcacgccctgcccgccaccttcggcgagccgtgggtccggacctggcacgccgcc
gggttcccgccgggccgcatcgcccggcccgcgctgcgccgcgcgctggccggagtgctc
ccgcaactggtgcccagcgtggtcagcctggtgggcggcgcggtcgcggtggaaaagatc
ttcaacatcccgggactcggccggctcgccttggactccgccctggcccaggacctcccg
ccgctgcaaaccgcgacactgctcctcgcactgctcggcgtcgcggccggtctgctcatc
aaaaccgtgcgccgcggcctgctcggcccggccctgcgcggtggcgaactggccgccgcc
ccggcaccagccctccggcgccgccgctccaccggccggctgttcggcgcctgcgcgctc
accctgtgcacgatcgtcctcatcggactgttccgggatccgtcgcaagtggacactgcg
gcgcgcctgctgccgccatcgctcacacatccgctgggcacggacgcactcggccgcgac
atgctggcccggctgggccacggagcgctgcgcacggcaggcgtcgctctcgccgtgacc
gcggtcagcgccgttctcggcgtgctgctcggcatggcgggccaagccgctgccgggctg
accgaagtggtgtcgacgctgcctgccgtgctggccggattgctgacaaccgccgtcacc
gggccgtcggtgtggggtgccgcctgcgcggtgtgcctggtcggctggacaccctatgcc
gcccagaccgcggcgttgctcgaacaggaacgggcaaccggctacctgcgggcctcgatc
tcgttcggagccggaccggcgcacctgctccggcaccacctgctgcccgcggtcctgccc
gccgtcgtgcgcaacgcgctcctgcgcctgcccaccaccgttctggtgctggcgtcactc
ggtttccttggtctgggcgagcaaccacccacgccggaatggggccgcctcctctcggaa
aaccagccgtacctggagttgtcgccatggaccacgctgggaccggcgggggcgctcatc
ctgctctccgtgctcgccgccgccggttcccccgttcaccggaacacccgccgcactcct
tgttga
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