Amycolatopsis sp. YIM 10: YIM_23505
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Entry
YIM_23505 CDS
T06270
Name
(GenBank) Ricin-type beta-trefoil lectin domain protein
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
YIM_23505
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
YIM_23505
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
RicinB_lectin_2
Glyco_hydro_95_C
Ricin_B_lectin
Motif
Other DBs
NCBI-ProteinID:
QFU89878
LinkDB
All DBs
Position
4888419..4891262
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AA seq
947 aa
AA seq
DB search
MPDLTRRQAMKLGAALVPAGWTAFPRAGSAAPGEVRAAGDLALWYDKPAGGDWLRALPVG
NGRLGAMVFGNTDTERLQLNEDTVWAGGPHNYDNPQGAGALAQIRQLVFANQWTQAQDRV
NQAMLGNPAAQLAYQPVGDLKLTLPGGTASGYERWLDLTTATTVATYTANGVRHRREVFA
SAPDQVIVVRLTADKPGAVTFTAAFSSPQRTTVSNPDSTTTALDGISGDMRGIAGSVKFQ
ALAGVIADGGSTSSSGGTLKVTNANSATLLISIGTSYVNYQTVNGDYRGIAQSRLNAAKG
VAYDMLRDRHVKDYQALFGRVALDLGRTAAADQPTDVRIAQHHNTNDPQFSTLLFQYGRY
LLISSSRPGTQPANLQGIWNDQLTPSWDSKYTLNANLPMNYWPADTTNLAECFEPVFRMI
GDLTVTGGRTAKTQYGAKGWVTHHNTDGWRGSSVVDGAVWGMWQTGGAWLATMIWDHYRF
TGDLAFLQQNYPAMKGAAQFFLDTLVTDPGSGHLVTNPSNSPEALHHANASICAGPTMDM
QILRDLFDGCAGATQVLGVDAGFRDQVLAARQKLAPMKIGSRGNIQEWLQDWVEIEPGHR
HISHLYGLHPSNQITRRGTPQLYTAARRTLELRGDAGTGWSLAWKINYWARMEEGGRARE
LLRLLVTPERLAPNMFDLHPPFQIDGNFGATSGIAEMLLQSHNGELHVLPALPSGWPAGS
VTGLRGRGGHTVGAVWSGGKASELTVTPDRAGPVRVRCGLFTGTWQLVDQTTGTEVQPSK
PEPDLIEFTAQAGHTYRATGQGSGSVVETGVYYRLAAQHSGKLADISGASAAAGALLVQW
QATGGTNQQFDFLDSGGGYYRIRARHSGLVLQAANSATGADITQQPDSGATSQQWQVTDH
GGGVIALHNRQSGLAMDVWNASTADGARVSQWNPTTAANQRFQLQRL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgccggatctgacccggcggcaggcgatgaagctcggcgcggcgctggtgcccgccggg
tggacggcgttccccagggccgggtcggccgcgcccggcgaagtacgggccgcgggcgac
ctggcgctgtggtacgacaagccggcgggcggcgactggctgcgcgcgctgcccgtcggc
aacgggcgcctcggcgccatggtcttcggcaacaccgacacggaacggttgcagctcaac
gaggacacggtgtgggcgggcggtccccacaactacgacaacccgcagggcgcgggcgcg
ctcgcgcagatccggcagctggtgttcgccaaccagtggacacaggcgcaggaccgcgtc
aaccaggcgatgctcggcaatcccgcggcccagctggcctaccagcccgtcggcgacctc
aagctcaccctgcccggcgggacggcttccgggtacgagcggtggctcgacctcaccacc
gccacgacggtggccacctacaccgcgaacggggtgcgccaccggcgtgaggtgttcgcc
agcgcgccggaccaggtgatcgtcgtgcggctgaccgcggacaaacccggcgcggtgacg
ttcacggccgcgttcagcagtcctcagcgcacgacggtgtccaatccggacagcaccacg
accgcgctggacggcatctccggtgacatgcgggggatcgccggctcggtcaagttccag
gcgctggccggtgtcatcgccgatggcggcagcaccagcagttccggtggcacgctcaag
gtgacgaacgcgaacagcgcgaccctgctgatctcgatcgggaccagctacgtcaactac
cagaccgtcaacggtgactaccggggcatcgcccagtcccgcctgaacgcggcgaagggc
gtcgcgtacgacatgctccgggacaggcacgtcaaggactaccaggcgctgttcggccgg
gttgcgctcgacctcggccgcaccgccgcggcggaccagccgaccgacgtccggatcgcc
cagcaccacaacaccaacgatccgcagttctccaccctgctcttccagtacggccgctac
ctgctgatctcgtcgtcgcggcccggcacgcagccggcgaacctgcagggcatctggaac
gaccagctgaccccgtcgtgggactcgaagtacaccctcaacgccaacctgccgatgaac
tactggccagccgacaccacgaacctggccgagtgcttcgagccggtgttccggatgatc
ggcgacctgaccgtcaccggtggccgcaccgcgaaaacgcagtacggcgccaagggctgg
gtcacccaccacaacaccgacggctggcggggcagctcggtcgtcgacggcgcggtgtgg
ggcatgtggcagaccggtggcgcctggctggccacgatgatctgggaccactaccggttc
accggtgacctcgcgttcctccagcagaactatccggcgatgaagggcgcggcgcagttc
ttcctcgacaccctggtgaccgatcccggctcgggtcacctggtcaccaatccgtcgaac
tcaccggaggcgctgcaccacgcgaacgcgagcatctgcgcgggcccgacgatggacatg
cagatcctgcgagacctgttcgacggctgcgccggtgccacccaggtgctcggggtggac
gccgggttccgcgaccaggtactggcggccaggcagaagctggcgccgatgaagatcggc
tcgcgcggcaacatccaggaatggttgcaggactgggtggagatcgagccgggacaccgg
cacatctcccacctgtacggcctgcacccgagcaaccagatcacccggcgcggcacgccg
cagctgtacaccgcggcccgccggacgctggaactgcggggtgacgccggtaccggctgg
tcgctcgcctggaagatcaactactgggcccggatggaggagggcggccgggcccgcgag
ctgctccgcctgctggtgaccccggagcggctggcgcccaacatgttcgacctccatccg
ccgttccagatcgacggcaacttcggcgccacctccgggatcgccgaaatgctgttgcag
agccacaacggtgagctgcacgtgctgcctgcgctgccgtcgggatggcccgccgggagc
gtgacgggcctgcgcgggcgcggtggccacacggtcggcgcggtgtggagcggcggcaag
gcgagcgagctgaccgtgacgccggaccgggccgggcccgtccgggtgcgctgcggcctg
ttcaccggcacctggcagctggtcgaccagaccaccggcaccgaggtccagccgtcgaag
ccggaacccgacctgatcgagttcaccgcgcaggccggtcacacctatcgcgccaccggt
cagggttcgggctcggtggtggagaccggcgtgtactaccggctggccgcccagcacagc
gggaagctcgcggacatcagcggtgcctccgccgccgcgggcgcactgctggtccagtgg
caggccaccggtgggacgaaccagcagttcgacttcctcgattcgggtggcggctactac
cggatccgtgcgcggcacagcggtctggtgctccaagcggcgaattcggccaccggcgcg
gacatcacccagcagccggacagcggcgccacgagccagcagtggcaggtgaccgaccac
ggtggtggggtgatcgccctgcacaaccggcagagcggtctcgccatggatgtgtggaac
gcctccaccgccgacggcgcccgtgtgtcgcagtggaaccccaccacagccgccaaccag
cggttccagctccagcgcttgtag
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