Amycolatopsis sp. YIM 10: YIM_24320
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Entry
YIM_24320 CDS
T06270
Symbol
dppA5
Name
(GenBank) Periplasmic dipeptide transport protein precursor
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_24320 (dppA5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_24320 (dppA5)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
YIM_24320 (dppA5)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Glyco_hydro_11
Motif
Other DBs
NCBI-ProteinID:
QFU90041
UniProt:
A0A5P9PP43
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All DBs
Position
5073265..5075091
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AA seq
608 aa
AA seq
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MRAVRTTWRRRAAALGATALVAGPVLAVGPAQAQQPTVLRVALVQSIDHLNPFTASFAST
AMIGRISWEFLTLASAEDNLPTAGLAEQWSPSPDGLTWTFKIRDTKWSDGTPLTARDAAF
TFNRMMSDPAAREANGTFVEQFQSVTATDDRTLTVTLKKPQASMTALDVPIVPEHIWSSV
TDMASPETDTVAKVGVGSGPFTITEYQTNQLVKMKANPHYWRGAPKVDELQFVKFDNADA
AVNALNNGEVDLINRLTATQFDSLNGKPGITTNKAVGRRYDELLMNPGAQNFDRQPIGDG
HPALKDVRVRKAIARAIDPATIIDKVLGGYGEAPGGIVPPMFKTYHYAPGPAEKYTFDLA
AANAALDQAGYPKGPDGIRVGPDGRKLEFRFTGHATRDYDQRVVKYVSGWLGEIGIKVIE
KLVSDNEVDESTSAGNYDLALSGWGTNPDPDYILAKQTCSVLPATAGSTSSNAFFCDAEY
DRLYALQAAEPDIAKRAEYAKQAQARYYDQVPSLVLDYKSALEAYRSDKFSSLTKQPVAD
GALMEQSGYWSFYGAVPAGEDAAAAGDSGGLPTGAWIAIGAGAVLVVVLVGVMVSRRGKS
AGSDDDKE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcagtgagaactacctggcggcggcgtgcggccgcgctgggcgccaccgcgctg
gtggccgggccggtgctggccgtggggccggcccaggcgcagcagccgaccgtgctgcgg
gtggctttggtccagtccatcgaccacctgaacccgttcaccgcgagcttcgcctccacc
gcgatgatcggccggatctcctgggagttcctcaccctggcctcggccgaggacaacctg
cccacggccgggctggcggagcagtggtccccgtcgccggacgggctgacctggacgttc
aagatccgcgacacgaagtggtccgacggcacgccgctgaccgcgcgtgacgccgccttc
accttcaaccggatgatgtccgatccggccgcgcgcgaggccaacggcaccttcgtcgag
cagttccagagcgtgaccgcgaccgacgaccgcacgctgaccgtcacgctgaagaagccg
caggcctcgatgaccgcgctcgacgtgccgatcgtgcccgagcacatctggtcgagcgtg
accgacatggcctcgccggagaccgacaccgtggccaaggtcggcgtgggctccgggccg
ttcaccatcaccgagtaccagaccaaccagctggtcaagatgaaagcgaacccgcactac
tggcggggcgcgccgaaggtggacgagctgcagttcgtcaagttcgacaacgccgacgcc
gcggtcaacgcgctgaacaacggcgaggtggacctgatcaaccggctcaccgcgacccag
ttcgactcgctcaacggcaagccgggcatcaccacgaacaaggcggtcggccgccgctac
gacgagctgctgatgaacccgggggcgcagaacttcgaccgccagccgatcggcgacggg
cacccggcgctcaaggacgtgcgggtgcgcaaggcgatcgcccgcgcgatcgacccggcc
accatcatcgacaaggtgctcggcggttacggcgaggcgccgggcggcatcgtgccgccg
atgttcaagacctaccactacgcgccgggcccggccgagaagtacaccttcgacctggcg
gccgcgaacgccgcgctggaccaggccggctatccgaaggggccggacgggatccgcgtc
ggcccggacgggcgcaagctggagttccgcttcaccgggcacgccacccgcgactacgac
cagcgcgtggtcaagtacgtctcgggctggctcggtgagatcggtatcaaggtgatcgag
aagctggtctcggacaacgaggtcgacgagtccacgtcggcgggtaactacgacctggcc
ctctcgggctggggcaccaacccggacccggactacatcctggcgaagcagacctgctcg
gtcctgcccgccacggccggtagcaccagcagcaacgcgttcttctgcgacgccgagtac
gaccggctctacgccctccaggccgcggagcccgacatcgccaagcgcgccgagtacgcg
aagcaggcccaggcccgctactacgaccaggtgccgagcctggtgctcgactacaagagc
gcgctggaggcttaccgctcggacaagttctcgtcgctgaccaagcagcccgtcgccgac
ggcgcgctgatggagcagagcgggtactggagcttctacggtgccgtgcccgccggtgag
gacgcggccgcggccggtgactcgggtggcctgccgaccggggcgtggatcgccatcggt
gccggtgcggtgctcgtggtcgtgctggtcggggtgatggtgtcgcgtcgcggcaagtcc
gccggttccgacgacgacaaggaatag
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