Amycolatopsis sp. YIM 10: YIM_24940
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Entry
YIM_24940 CDS
T06270
Symbol
xerC4
Name
(GenBank) Tyrosine recombinase XerC
KO
K03733
integrase/recombinase XerC
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amyy03036
]
YIM_24940 (xerC4)
Chromosome and associated proteins [BR:
amyy03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
YIM_24940 (xerC4)
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
DIMCO_N
Motif
Other DBs
NCBI-ProteinID:
QFU90164
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Position
5190339..5191388
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AA seq
349 aa
AA seq
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MAIMHQTVPEFPSSGRETVGAVRYKIHMRVLDAQQAFFAARRPRKDSPHTTAAYRRDLAG
LTSLLAEAAGRDVDELRVEDLTTTSLRTAFGAFADGHAKSSVLRAWSTWNQFLTFCVSDG
LLPGNPMGAVARPKTPPLVPKPLRGEDTPEKLLAAATEGARQARDPWPERDVLVIALGLV
AGLRAAEMRSLSVESLIGRSGEKRLHVQGKGSRDRSIPVQPVMEKIIDDYLASCRRKFPH
QRFGRSAPLLRDRAGEPIGRGALDYLVKSCYRAAGLQDRVPTGANLHALRHTFATRLAED
GATASEIMALLGHASLATSQNYIEATGREQRAAVASNRTYQALNTSFTE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgattatgcatcaaacagtacccgagttcccgagcagcggccgggaaactgtcggt
gctgtgcggtacaagatccacatgagagttctcgacgcgcagcaggccttcttcgccgca
cgtcgtccgcgcaaggactctccgcacaccaccgccgcttaccggcgggatctggcgggc
ctcacttccctgctggccgaggccgccgggcgggatgtcgacgagttgcgcgtcgaggat
ctgacgaccacctcgttgcgaacggcgttcggcgcgtttgccgacgggcacgccaaaagc
tccgtgttgcgcgcctggtcgacctggaaccagttcctcaccttctgcgtgtccgacggc
ctgctcccgggcaatccgatgggcgcggtcgcccgcccgaagacccctcccctggttccg
aagccgctgcggggtgaggacacgcccgagaagctgctcgcggccgctaccgagggtgcg
cggcaagcccgtgacccgtggcccgagcgggacgtgctggtgatcgcgctcgggctggtg
gccgggttgcgagcggcggagatgcgctcgctgagcgtggagtcgctgatcggacgatcc
ggcgagaagcggctgcacgtccagggcaagggcagccgggatcggtcgatccccgtgcag
ccggtgatggagaagatcatcgacgactatctcgcctcgtgccgccggaagttcccccac
cagcggttcgggcggtcggcgccgttgctgcgggatcgcgccggcgagccgatcgggcgc
ggtgcgctcgactacctggtcaagtcctgctatcgcgccgccgggttgcaggaccgggtg
ccgacgggcgcgaatctgcacgccctgcggcacaccttcgccacgcggctcgccgaggac
ggtgccacggcgtcggagatcatggcgctgctcgggcacgcgagcctggccaccagccag
aactacatcgaggcgaccgggcgcgagcagcgggccgcggtggcgagcaatcggacatac
caggcgctgaacacgagcttcacggaatga
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