Amycolatopsis sp. YIM 10: YIM_26680
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Entry
YIM_26680 CDS
T06270
Name
(GenBank) Soluble hydrogenase 42 kDa subunit
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00250
Alanine, aspartate and glutamate metabolism
amyy00260
Glycine, serine and threonine metabolism
amyy00630
Glyoxylate and dicarboxylate metabolism
amyy00680
Methane metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
amyy01210
2-Oxocarboxylic acid metabolism
amyy04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
YIM_26680
09102 Energy metabolism
00680 Methane metabolism
YIM_26680
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
YIM_26680
00260 Glycine, serine and threonine metabolism
YIM_26680
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
YIM_26680
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
amyy01007
]
YIM_26680
Enzymes [BR:
amyy01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
YIM_26680
2.6.1.45 serine---glyoxylate transaminase
YIM_26680
2.6.1.51 serine---pyruvate transaminase
YIM_26680
Amino acid related enzymes [BR:
amyy01007
]
Aminotransferase (transaminase)
Class V
YIM_26680
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QFU90510
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Position
complement(5585061..5586227)
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AA seq
388 aa
AA seq
DB search
MSFAGGRHFLQIPGPTNVPDSVLRAMAAPTIDHRGPEFGELGRTVLAGLKPVFRTTNPVL
IYPASGTGAWEAALVNTLSPGDRVLCFETGHFATLWQDMARKLGLTVDFVPGDWRHGVDP
AEVADRLGRDTAHEIKAVCVVHNETSTGVTSRIAEIRAAIDDAGHPALLLVDTISSLGSI
DYRHDEWGVDVTVAGSQKGLMLPPGLSFNAISDKALAASEKAKLPRSFWDWRPLLDAADR
GYFPYTPATNLLYGLREALRLLEAEGLPNVFARHLRHAEATRAAVAGWGLEVLCADEREH
SAALTAVIVPEGHDADKIRALILDRFDMSLGAGLGKLAGRIFRIGHLGSFNDLSLAGTLS
GVQMGLALSGVPIRPDGVNAALDRLSVA
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcgcgggcggcaggcatttcctgcagattcccggccccaccaacgttcccgac
tcggtgctccgggcgatggccgcgccgaccatcgaccacagaggaccggagttcggggaa
ctcggccggaccgtgctcgccgggttgaagccggttttccgcaccacgaacccggtgctg
atctatcccgcgtccggcaccggcgcctgggaagccgcgctggtcaacacgctcagcccc
ggcgatcgggtgctctgcttcgaaaccgggcacttcgccacgctgtggcaggacatggcg
cgcaagctcgggctgaccgtcgacttcgtgccgggggactggcgccacggtgtcgacccg
gctgaggtcgccgaccggctcggccgcgacaccgcgcacgagatcaaggccgtttgcgtg
gtgcacaacgaaacctcgaccggcgtgaccagccggatcgccgagatccgggccgcgatc
gacgacgccgggcacccggcgctgctgctggtggacaccatctcctcgctcgggtccatc
gactaccggcacgacgaatggggcgtcgacgtcaccgtcgccggttcgcagaagggcctg
atgctgccgccgggcctgagcttcaacgcgatcagcgacaaagcccttgccgcgtcggag
aaagcgaagctgccacggtccttctgggactggcggccgctgctcgacgccgctgaccgc
ggctattttccctacaccccggccacgaacctgctctacggcctgcgggaagcgttgcgg
ctgctggaagcggagggcctgcccaacgtcttcgcccgtcacctccggcacgccgaggcg
acgcgcgcggcggtggcgggctggggcctggaggtgctgtgcgccgacgagcgtgagcac
tccgccgcgctgaccgcggtgatcgtgcccgaaggccatgacgcggacaagatccgcgcg
ctcatcctggaccgcttcgacatgtcgctcggcgccgggctgggcaagctggccgggcgg
atcttccggatcgggcacctcggctccttcaacgatctgagcctggcgggcacgctgtcg
ggcgtgcagatgggcttggccctgtccggcgtgccgatccggccggacggggtcaacgcc
gcgctcgaccggctttcggtggcgtga
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