Amycolatopsis sp. YIM 10: YIM_28150
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Entry
YIM_28150 CDS
T06270
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00900
Terpenoid backbone biosynthesis
amyy00997
Biosynthesis of various other secondary metabolites
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
Module
amyy_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
YIM_28150
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
YIM_28150
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
amyy01006
]
YIM_28150
Enzymes [BR:
amyy01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
YIM_28150
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
YIM_28150
2.5.1.29 geranylgeranyl diphosphate synthase
YIM_28150
Prenyltransferases [BR:
amyy01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
YIM_28150
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
QFU90804
UniProt:
A0A5P9PRN1
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All DBs
Position
5878580..5879602
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AA seq
340 aa
AA seq
DB search
MSTVETIGDVRTAGEILAWSRSSVQPALRAAVDTLPGSLRRIAGYHFGWLDESGAPADGD
GGKALRPALVLLSAEAVGGGPRAVSAAVAVELVHNFSLLHDDVMDGDVTRRHRATAWHVF
GTGAAILAGDALLTLAMDVLAPSGQPALRVLGNAVQDLVEGQIADLSFEKRIDVTVPECV
RMAERKTGALLGASCALGALAGGADADRTNELRQFGEQLGLAFQFIDDLLGIWGDPAVTG
KSVHNDLRSRKKSLPVVSALTSGTPAGRELAELYQAASLTETGLARAAELVELAGGRAWS
RAQADDLLGEARQRLRAAHPEPRAGTGLETLAKLATHRDR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgtggaaaccatcggtgacgtgcgcacggcgggcgagatactggcctggagc
cggtcctcggtccagcccgcgctgcgggcggcggtggacaccctgccgggttcgctgcgg
cggatcgccggttatcacttcggctggctcgacgaaagcggcgcgcctgccgacggtgac
ggcggcaaggcgctgcggcccgcgctggtgctgctcagcgccgaggcggtgggtggcggg
ccgcgggcggtatcggcggccgtcgcggtcgaactcgtgcacaacttctcgctgctgcac
gacgacgtgatggacggggacgtgaccaggcggcaccgggcgaccgcctggcacgttttc
ggcaccggcgcggccatcctcgccggtgacgcgctgctgaccctggcgatggacgtgctg
gcgccgagcgggcagcccgcgctgcgtgtgctcggcaacgcggtgcaggacctggtcgaa
gggcagatcgccgatctgtccttcgagaagcggatcgacgtgaccgtgccggaatgcgtc
cggatggccgaacgcaagaccggggccctgctgggtgcgtcgtgcgcgctcggcgcactc
gccggtggcgcggatgccgaccggacgaatgagctgcggcagttcggggaacagctcggg
ctggccttccagttcatcgacgacctgctcggcatctggggcgacccggcggtgaccggc
aagtcggtgcacaacgacctgcgcagccgcaagaagtcgctgccggtggtgtccgcactg
acctcgggcaccccggccggtcgcgagctggccgagctgtaccaggccgcatcgctgacc
gagaccgggctggccagggccgccgaactggtggaactggccggtggccgggcgtggagc
cgggcgcaggccgacgacctgctcggcgaagcacggcaacggctgcgtgccgcgcacccg
gaaccccgcgcgggaaccggcctggagaccctggcgaagctggccacgcaccgggaccgc
tga
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