Amycolatopsis sp. YIM 10: YIM_29240
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Entry
YIM_29240 CDS
T06270
Symbol
msbA1
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24910
ATP-binding cassette, subfamily B, bacterial RamA/AmfB
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_29240 (msbA1)
Transporters [BR:
amyy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
YIM_29240 (msbA1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_29
SMC_N
Cuticle_1
AAA_23
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
QFU91020
UniProt:
A0A5P9PUZ4
LinkDB
All DBs
Position
complement(6110326..6112038)
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AA seq
570 aa
AA seq
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MPVGDLRRDARTLWSSVRSSGRDGLALLVLTAVEVAALLAVPGALAAAVDAISGRGSSGA
AIALVCVVLVLGSAAGAGTVVLEKRAQVSGTLSLRRRLVRHLLRLDLGAFRRYGTGDLLG
RISQSAAMTSSAVTALTALLVSVVTSIAGLVLLVLLDLRLGLIVLAAAPLIWWQAGLLTR
RMSANTTDYQTRQGELTGRFTDAVRGARTIRASGTAAREVDRVVAGLPALTAAGHEFWRV
LRTAAFRVNLVMPLLQVAVLAVAGYSVLHGRMTAGELLAAQGYFGFAVGMFQQTMVLGRV
ARALGSATMVAEVLAEPVRPAGTRTLPPGPGALSLRGVRVSPVLDGVDVDFPPGVAIAIV
GRSGAGKSTLTEVAGGLLVPEAGSVRLDGVPLTELRRDELGGAVTYAFEKPVLHGETVAD
AIAYADHPATPAQVEQALRVSAAADFVRRLPAGAGTRRSRLLLSGGELQRLGLARAAWRD
ARVVVLDDATSSLDTATEAEVTAALDRALRGRTRLIVAHRAATAASADLVAWLDSGRIRA
LAPHRELVRDPDYRALFGLRQPAAAGSEVR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcggtgatctccgccgcgacgccaggacactgtggagttcggtgcggtcctcg
ggtcgtgacggtctcgcgttgctggtactgacggcggtcgaggtggcggcgctgctggcc
gtgccgggtgcactggcggccgcggtggacgcgatcagcggccgggggagcagcggcgcc
gcgatcgcgctggtctgcgtcgtgctcgtgctgggctccgccgccggggcgggcacggtg
gtgctggagaaacgggcgcaggtcagtggcacgttgtcgctccggcgcaggctggtgcgg
cacctgctccgcctggatctcggcgcgttccggcggtacggcaccggtgacctgctcggc
cggatctcgcagtcggccgcgatgacctcgagcgcggtgaccgcgctgaccgccctgctg
gtctcggtggtcacctcgatcgccggactggtgctgctcgtgctgctcgacctccggctg
ggcctgatcgtgctggccgcggcaccactgatctggtggcaggcgggcctgctgacccgc
cggatgagtgcgaacaccaccgattaccagacccggcagggggagttgaccggccggttc
accgacgcggtccgcggggcgcggacgatcagggcgagcggaacggccgctcgcgaggtc
gaccgcgtggtcgcgggactgcccgcgctgaccgccgcggggcacgagttctggcgggtg
ctccggaccgcggccttccgcgtcaacctggtgatgccgttgctgcaggtggccgtgctc
gcggtggcgggctacagcgtgctgcacggacggatgaccgccggtgaactcctcgccgcg
caggggtacttcggcttcgccgtcggcatgttccagcagaccatggtgctgggcagggtc
gcgcgggcgctgggttcggcgaccatggtcgccgaggtgctggcggagccggtgcggccg
gccggtaccaggacgctgccgccggggccgggcgcgctgagcctgcgcggggtacgggtg
agcccggtgctcgacggcgtcgacgtcgacttcccgccgggggtggcgatcgcgatcgtc
ggccggtccggcgccgggaagtccacgctgaccgaggtcgccggtggcctgctggttccg
gaggcggggtcggtgcgcctcgacggcgtgccgctgaccgaactccggcgtgacgagctg
ggcggggcggtgacctacgccttcgaaaagccggtgctgcacggcgaaacggtcgcggac
gcgatcgcctacgccgatcacccggccaccccggcgcaggtcgagcaggcgctgcgggtc
agcgcggcagccgatttcgtgcgccgcctgcctgccggagccgggacgcgccggagccgg
ttgctgctgtccggcggtgagctgcaacgcctcggcctcgccagggcggcgtggcgggac
gcgagggtggtcgtgctggacgacgccacgtccagtttggacaccgcgaccgaagccgag
gtcacggcggcgctggaccgtgcactgcgtggccggacccggctgatcgtcgcgcaccgg
gcggccaccgcggcgtcggcggatctggtcgcctggctggacagcggccggatccgggcg
ttggcccctcatcgggaactcgtgcgggatccggactaccgcgcgttgttcggcctgcgg
caaccggccgccgccgggtcggaggtgcggtga
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