Amycolatopsis sp. YIM 10: YIM_30450
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Entry
YIM_30450 CDS
T06270
Symbol
yiaJ1
Name
(GenBank) HTH-type transcriptional regulator YiaJ
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_30450 (yiaJ1)
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
IclR family
YIM_30450 (yiaJ1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
HTH_20
HTH_Crp_2
DUF3363
MarR_2
RPA_C
HTH_69
Motif
Other DBs
NCBI-ProteinID:
QFU91256
UniProt:
A0A5P9PS99
LinkDB
All DBs
Position
complement(6409098..6409886)
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AA seq
262 aa
AA seq
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MNDTQMIGEAKAPDESKLVGSDRVLAVLKELAKYPDGVGLEEMTRVIGSPKPTVHRALGA
LRRAGLADQDPRGRYVLGDEFLRMAFAHHEVRPDHVRVHPVLEVLATRFGETAHYAVLDG
SEVVYRAKVDPPTGAVRLTSTVGGRNPAHATAVGKLLLSYELDTREAVEAWLGDRTPARP
TPRTRCTASELHAELVLARERGYAVDDQECEVGVNCLAVPVHATSPSAPSGAVSVSALAY
RTPLPVLVDAVGEIRRLLGPLG
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacgcagatgatcggcgaagcgaaagcacccgacgagagcaagctcgtcggc
tccgatcgtgtgctcgcggtgctcaaggaactggccaagtaccccgacggggtgggcctg
gaagagatgacccgggtcatcggcagcccgaagccgacggtgcaccgggcgctcggcgcg
ctgcgccgcgccgggctggccgaccaggatccccgcggccgctacgtgctgggtgacgag
ttcctgcggatggccttcgcgcaccacgaggtgcggccggaccacgtgcgcgtccacccg
gtgctggaggtgctggcgacgcgcttcggcgagaccgcgcactacgccgtgctcgacggg
tccgaggtggtctaccgcgccaaggtcgacccgcccaccggtgccgtccggctcacctcg
accgtcggcggccgcaatccggcgcacgccaccgcggtgggaaagctgctgctgtcgtac
gaactggacacccgcgaggcggtcgaagcgtggctcggcgaccggacgcccgcccgcccg
acacctcggacccggtgcaccgcaagcgaactgcacgccgagctggtgctcgcgcgtgaa
cgcggttacgccgtggacgaccaggaatgcgaggtgggcgtcaactgcctcgccgtcccg
gtgcacgccacgtcaccgtcggcgccatccggcgcggtgagcgtcagcgcgctcgcctac
cgcaccccgttgcccgtgctggtcgacgccgtcggggagatccggcggctgctcggcccg
ctcggctga
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