Amycolatopsis sp. YIM 10: YIM_31830
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Entry
YIM_31830 CDS
T06270
Symbol
rbsB3
Name
(GenBank) D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
amyy02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_31830 (rbsB3)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
YIM_31830 (rbsB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_31830 (rbsB3)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
YIM_31830 (rbsB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
Plug
ABC_sub_bind
Hpr_kinase_N
Motif
Other DBs
NCBI-ProteinID:
QFU91529
LinkDB
All DBs
Position
complement(6696847..6697851)
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AA seq
334 aa
AA seq
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MPKRARGAFSLLLGVTLVATVASACGTTSENAGGPAEPKPCGGAGGKYTIGVSQANVAEP
YRERMDADIRKAAAGVPQFTVNFADAQQDNSKQVEQVENFLTQQIDLLIISPNEATPLTS
VVKKAYERGVPVLVLDRKVNGDSFTSFIGADNFDIGRRAGEFVAQTLLPGGGKVAELKGL
AGSSPAKERSDGFKLGIGGKNIEIVASADGDWLRDRGRQQADALLKGTPGIQVVYAHNDP
MGEGAYLAAQDAGLTGIKIVGIDGLPIEAGGIKAVEAGRLAATFVYPTGGKEAVEAARKI
LVDCQQVPKVQGLAIERVTPDNAAEVYARLNAGG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacgagcgcgtggcgccttttcactgctgcttggcgtgacactggtggctacg
gtggcgtccgcctgcgggaccaccagcgagaacgccggtggcccggccgagcccaagccg
tgcgggggagccggcggcaagtacacgatcggggtgagccaggccaacgtcgccgagccg
taccgcgagcggatggacgccgacatccggaaggccgccgccggcgtcccccagttcacg
gtgaacttcgccgacgcccagcaggacaactccaagcaggtcgagcaggtggagaacttc
ctcacccagcagatcgacctgctgatcatcagcccgaacgaggcgaccccgctgacctcg
gtggtgaagaaggcctacgagcggggcgtgccggtgctggtgctggaccgcaaggtcaac
ggcgactcgttcacctcgttcatcggcgccgacaacttcgacatcggccgccgggccggc
gagttcgtcgcccagacgctgctgcccggcggcggcaaggtcgccgaactgaaggggctg
gccgggtcgagcccggcaaaggagcgcagcgacgggttcaagctgggcatcggcggcaag
aacatcgagatcgtggcgagcgccgacggcgactggctgcgcgaccgcggccgccagcag
gccgacgcgctgctcaagggcacgcccggcatccaggtggtctacgcgcacaacgacccg
atgggcgagggcgcctacctggccgcgcaggacgccgggctgaccgggatcaagatcgtc
ggcatcgacgggctgccgatcgaggccggcggcatcaaggcggtggaggcgggcaggctg
gccgccaccttcgtctacccgaccggcggcaaggaggcggtcgaggccgcgcgcaagatc
ctggtcgactgccagcaggtgcccaaggtgcagggcctggcgatcgagcgggtgaccccc
gacaacgcggcggaggtctacgcgcggctcaacgccggcggctga
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