Amycolatopsis sp. YIM 10: YIM_32960
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Entry
YIM_32960 CDS
T06270
Name
(GenBank) translocation protein TolB
Organism
amyy
Amycolatopsis sp. YIM 10
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
nSTAND1
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_TEP1_C
NBCH_WD40
Ge1_WD40
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_RIG_2nd
PD40
DUF7165
eIF2A
AAA_16
Cytochrom_D1
WD_LRWD1
Beta-prop_WDR35_TULP_N
AAA_22
AAA_19
AAA_29
NACHT
Motif
Other DBs
NCBI-ProteinID:
QFU91753
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Position
6967616..6971344
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AA seq
1242 aa
AA seq
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MGRRERPLDPDADPLQRFAFELRQLRSGAGGPSYRELARRAHYSVTALAEAAGGQILPSL
AVTLAYVRACGGDPQEWETRYRDLAEELTSDRPDSGGPSPYLGLAAFQPDDADRFFGRDS
LVEHLVHQVARSPVVAVFGASGSGKSSVIRAGLIPASRAHPAFSGHRWSCVLLTPTRRPL
RQLARAVAELCGGEPDSGEPGWLDRALRHAGLDGGTRVLLVVDQFEELFTLCQEADERVE
FIDVLLDAARGPGRVAKVVLGVRADFYGYCATHPGLLAMLRQGAQVLVGPMTRDELRSAI
TQPAAMAGLAVERELVATMIADITDEPGGLPLLSHALLETWRHRRNNTMTQAAYHVCGGV
HGALAQTAERLYAEFDAGEQEVAQQIFLRLTTLGDGIGDTRRRARHSELATVGAPAVVSR
VLDRLAAARLVVIGTDSVEVAHEALIRAWPRLGRWLTDDRENVLLHRRITDATQDWESSG
RNPELLYRGTQLDQVIAWAGPAHRAASLNAGEREFLDAAIQLRNRQTRSRKRRALRLRVA
TAVVVALLAAASVITLRQRTEARDQHRVAVARQLVAEATALRETDPLRAAQLSLAAWRTA
PDVPASRDSLLSTQAYPLPTRLLGHTGEVRDAAFSPDGRILATSAGDATVRLWDVTARAP
IGEPLTGHTAIVNGLAFSPDGTVLATASYDQTVRLWDVARREPVGAPMTGHTSTVTGIAF
SPGGRLLVTGGADSTLRTWDTTSRTAVGEPVTGHTGPITGVALSSDGLTAATSSNDKTVR
LWNLATRTPIGEPLTGHTNVTNGVAFSPDGRLLASTSADKTVRLWDVAGRTPVGAPLTGH
TNVTYGVAFSPDGRALATSGWDKTVRIWDTASGRQQGTALTGSTSSVLNLAFSPDGSALA
GGDSDNAILVWPQRKTLVPAHTDAVYAVAVSPDGSVLGTAADDRTVRLWAAGTHEPLAAP
LTGHTAEVRAVAFGPQGGILATGSWDGSLRLWDIATRAPVGPPLTGHVDWVRGLAFSPDG
RLIATAGMDMTVRLWDVATRTPAGPPLTGHTNSVTGIAFSPDGRTLATAANDKTVRLWDV
ATRTPIGEPLTGHASVVRDVVFSPDGRFLASAGDDKTIRLWDAAGHRPVATLTGHTGEVL
KLAFSPDGRELASTSLDKTVRLWDTTNRATTTVLSTGTGLAGITYTPDGLLTGGVTGNIL
LWTTDPARVADHICTATGAGLSDHEWARYVPTWPKPEICPAK
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcgtgagcgtccgcttgatccggacgcggatccgttgcagcggttcgcgttc
gaattgcggcagttgcggtcgggggcgggagggcccagctaccgggagttggccaggcgg
gcgcactattcggtgacagcgctggccgaggcggcgggcgggcagatactgccgtcgctg
gcggtcacgctggcctatgtgcgggcctgtggtggcgatccacaggaatgggagacccgc
taccgggacctggccgaggagctgacctccgaccggccggattcgggtggtccctcgccc
tatctcggcctggccgcgttccagcccgacgacgccgaccggttcttcggtcgcgacagc
ctggtcgagcacctcgtccaccaggtcgcccggtcaccggtcgtcgcggtgttcggcgcg
tcgggcagcgggaagtcttcggtgatccgcgcgggcctcatcccggcgagccgggcgcat
cccgcgttctccggacaccggtggtcctgcgtgctgctgacgccgacccgccggccgttg
cgccagctcgcccgcgccgtcgcggagttgtgcggcggcgagcccgactccggggagccc
ggctggctggaccgggcactgcgccacgccggcctcgacggcggcacccgggtcctgctg
gtcgtcgaccagttcgaggagttgttcacgctgtgccaggaggcggacgaacgggtcgag
ttcatcgacgtcctgctcgacgccgcccgcggtcccggccgggtggccaaggtcgtgctg
ggtgtccgcgccgacttctacgggtactgcgcgacccatcccggcctgctggcgatgctg
cggcagggcgcccaggtgctggtcggccccatgaccagggacgaactgcggtccgcgatc
acccagccggcggcgatggccgggctggccgtcgagcgggagctcgtcgcgaccatgatc
gcggacatcaccgacgaacccggcgggctgccgctgctgtcgcacgcgctgctggaaacc
tggcggcaccggcgcaacaacaccatgacccaggcggcttaccacgtgtgcggcggcgtg
cacggcgctctcgcccagaccgccgaacgcctgtacgccgagttcgatgccggggaacag
gaggtggcccagcagatcttcctgcggctgaccacgctcggcgacggcatcggcgacacc
cggcgccgcgcacgccacagcgagctggccaccgtcggcgccccggccgtcgtgagccgg
gtgctggacaggctcgccgccgcccggctcgttgtcatcggcaccgacagcgtcgaagtc
gcgcacgaggcactgatccgggcgtggccccgactgggtcgctggctcaccgacgaccgc
gaaaacgtgctgctccaccgcaggatcacggacgcgacccaggactgggagtcctccggg
cgcaaccccgagctgctctaccggggaacccagctcgaccaggtgatcgcgtgggcgggc
ccggcgcaccgcgcggccagtctcaacgccggtgaacgtgagttcctcgacgccgcgatc
cagctgcggaacaggcaaacccgatcacggaagcggcgggcgcttcgcctgcgggtcgcc
accgcggtcgtggtggcgctgctcgccgcggcttccgtgatcactctccggcagcgcacc
gaagcccgcgaccaacaccgggtggcggtcgcgcgccagctcgtcgccgaggccaccgcg
ctgcgtgagaccgatccactgcgtgccgcccagctcagcctcgccgcgtggcggacagcg
ccggacgtcccggccagccgtgacagcctgctcagcacccaggcatatccgctgcccacc
cggctgctcggccacaccggcgaggtgcgcgacgcggcgttcagcccggacggccgcatc
ctggccacctcggccggagacgcgaccgtgcgcctgtgggatgtgacggcccgggccccg
atcggcgaaccgctgaccgggcacaccgcgatagtgaacggcctggcgttcagtccggac
gggaccgtgctggcgaccgcgtcctacgaccagaccgtacggctgtgggacgtcgcgcgc
cgcgagccggtcggtgcgcccatgaccgggcacacgagcaccgtcaccggcatcgcgttc
agccccggcggacgcctgctcgtcaccggtggcgccgacagcaccctgcggacctgggac
accaccagccggaccgcggtcggcgagccggtgaccgggcacacgggcccgatcaccggc
gtagcgctcagctccgacggcctcaccgcggccacctcgagcaacgacaagaccgtgcgc
ctgtggaacctggcgacccggaccccgatcggcgaaccgctgaccgggcacaccaacgtc
accaacggtgtcgcgttcagcccggacgggcgactcctcgcttcgaccagcgcggacaaa
acggtgcgcctgtgggacgtcgcgggcaggacccccgtcggcgcgccgctgaccgggcac
accaacgtcacctacggcgtggcgttcagcccggacggccgcgcgctggccaccagcggc
tgggacaagacggtgcggatctgggacaccgccagcggacgccagcagggcaccgcgctc
accgggtcgacgagcagcgtgctgaacctcgcgttcagcccggacggttccgcgctcgcc
ggcggcgactcggacaacgcgatcctggtctggccacagcgaaaaaccctcgttcccgcg
cacaccgacgccgtctacgccgtggcggtgagccccgacggcagtgttctcggcaccgcc
gccgacgaccggacggtgcggctgtgggcagcaggcacacacgaaccactcgccgcgccc
ctcaccgggcacaccgcggaagtccgtgcggtggcgttcggtccgcagggcgggatcctg
gcgacgggtagctgggacggaagtctgcggctgtgggacatcgcgacccgcgcgccggtg
gggccgccgctcaccgggcatgtcgactgggttcgcggcctggcgttcagtcccgacggg
cgcctgatcgccaccgcgggcatggacatgaccgtccggctgtgggacgtggccacccgc
acgcccgccgggccgccgctcaccgggcacacgaactccgtgaccgggatcgcgttcagc
cccgacggccgcaccctcgccaccgccgccaacgacaaaacggtccgcctgtgggacgtc
gcgacccgaaccccgatcggggaaccgctgaccgggcacgccagcgtggtgcgcgacgtc
gtgttcagcccggacgggaggttcctggccagtgcgggggacgacaagaccatccgcctg
tgggacgccgccggtcaccggccggtcgccacgctgaccgggcacaccggcgaagtcctc
aagctggccttctccccggacggacgcgaactggccagcacctcactggacaagacggtt
cgactgtgggacacgacgaaccgtgccacgacgacggttctcagcaccggcaccggtctc
gcgggcatcacctacaccccggacggcctgctgaccggcggggtcaccggcaacatcctg
ttgtggaccaccgatccggcgcgggtggccgaccacatctgcaccgccaccggcgccggc
ctgtccgaccatgaatgggccagatacgtgcccacctggccgaaaccggagatatgcccc
gcgaaatga
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