Amycolatopsis sp. YIM 10: YIM_34350
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Entry
YIM_34350 CDS
T06270
Symbol
cdhR12
Name
(GenBank) HTH-type transcriptional regulator CdhR
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_34350 (cdhR12)
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
AraC family
YIM_34350 (cdhR12)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_23
HTH_11
TetR_N
HTH_24
Xre-like-HTH
HTH_Crp_2
HTH_20
DUF746
HTH_17
HTH_38
HTH_DeoR
GntR
Motif
Other DBs
NCBI-ProteinID:
QFU92031
UniProt:
A0A5P9PUR8
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All DBs
Position
7249271..7250206
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AA seq
311 aa
AA seq
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MHRVVALVRPVQSTFELGCAAEVFGTDRDGVPRHYEFEVCAETPGPVPTTAGYAMSVSRG
LSALAAADTVIIPGWAPVEAPLSPRVRRALLRAHARGARLVTICSGVFALARTGLLDGRS
ATTHWARAEQLRQEFPEVRVEPDRLYVDHGDVATSAGAGAGIDLCLHLVRRDHGAAHAAL
VARHMVVPPHRDGGQVQYAPPAPPEDALDGLLDWAGARLGTPLSVAELAAHLNVSPRTLA
RRFAEQLGTSPGAWLLSRRVAEARTLLEETNLPVEAIAARVGLTSAVNLRRRFHALVGTT
PGAYRRAFRVT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtgtggtggccctcgtccggccggtgcagtcgaccttcgaactcggctgcgcc
gccgaggtcttcggcaccgaccgggacggtgtgccgcggcactacgaattcgaggtgtgc
gcggaaaccccggggccggtgccgaccacggccgggtacgcgatgtccgtctcgcggggc
ctgtcggcgctcgcggccgcggacacggtgatcattcccggctgggcgccggtcgaggcg
ccgttgtccccgcgcgtgcgccgggcgctgctgcgggcgcacgcgcgcggcgcccggctc
gtcaccatctgctccggcgtgttcgcgctggcccgcaccggactgctcgacggccgctcg
gccaccacgcactgggcgcgcgccgagcagctgcgacaggagttccccgaggtccgcgtg
gaaccggaccggctctacgtggaccacggcgacgtcgccaccagcgccggcgccggcgcc
gggatcgacctctgcctgcacctggtccggcgggaccacggggccgcgcacgccgcactc
gtcgcgcggcacatggtggtgccaccgcaccgcgacggcggtcaggtgcagtacgcgccg
cccgccccgcccgaggacgcgctggacgggctgctcgactgggcgggcgcccgcctcggc
accccgttgtcggtggccgaactggccgcgcacctcaacgtctcgccacgcacgctggcc
cggcggttcgccgagcagctcggcacgagtcccggcgcgtggctgctgtcccgccgggtg
gccgaggcgcgcaccctgctggaggagacgaacctgccggtcgaggcgatcgccgcccgc
gtcggcctgacctccgcggtcaacctgcgccgccgcttccacgcactggtcggcaccacg
cccggcgcctaccggcgggcgttccgcgtcacgtga
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