Amycolatopsis sp. YIM 10: YIM_34970
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Entry
YIM_34970 CDS
T06270
Symbol
pelA2
Name
(GenBank) Pectate trisaccharide-lyase precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00040
Pentose and glucuronate interconversions
amyy01100
Metabolic pathways
amyy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
YIM_34970 (pelA2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
YIM_34970 (pelA2)
Enzymes [BR:
amyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
YIM_34970 (pelA2)
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Glyco_hydro_28
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
QFU92155
UniProt:
A0A5P9PW00
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Position
complement(7387557..7388501)
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AA seq
314 aa
AA seq
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MRRSFARRSLPGLLTVAAAAALTVATAGPASAAGTPTGFAAGTTGGGSTPAVTVTTASAL
ISAMQSSSPAVIRVSGTISISGMQDVKSNKTLIGVGSGATITGGGLDVDSATNVIIQNLN
FRNWADDAINVTDASTKIWIDHNTFSDGYDGAVDIKRASDYVTVSWNKFTSHDKTMLLGH
SDGNGSQDRGHLRVSYHHNYFDGTGQRHPRVRFGNPVHVYNNYYGGVTDYGVASTVEAGV
LVEGNYFENTEDPFHRGEGSSPGGSLVAKNNHFVNSGSGDQGGSVNAVPYSYSLDQASSV
KSIVQGGAGTGKVG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagatcgttcgccaggcgaagcctgcccggcctgctcaccgtggcggcggccgcg
gcgctcacggtggccaccgcgggtcccgcctcggccgcgggcaccccgaccgggttcgcc
gccggcaccaccggcggcggcagcacccccgcggtcaccgtgaccaccgcttcggcgctg
atcagcgcgatgcagtcgagcagccccgcggtgatcagggtcagcggcaccatctcgatc
agcgggatgcaggacgtgaagtcgaacaagacgctgatcggcgtcggctccggcgccacc
atcaccggtggcggactggacgtcgacagcgccaccaacgtgatcatccagaacctgaac
ttccggaactgggccgacgacgcgatcaacgtcaccgacgcctcgaccaagatctggatc
gaccacaacaccttcagcgacggctacgacggcgcggtggacatcaagcgcgcctccgac
tacgtgaccgtgtcgtggaacaagttcacctcccacgacaagaccatgctgctcgggcac
agcgacggcaacggcagccaggaccgcggtcacctgcgggtcagctaccaccacaactac
ttcgacggcaccgggcagcgccacccgcgcgtgcgcttcggcaacccggtgcacgtgtac
aacaactactacggtggcgtgaccgactacggtgtcgcgtccacggtggaagccggtgtg
ctcgtcgagggcaactacttcgagaacaccgaagacccgttccaccgcggtgagggcagc
tcgcccggcggttcgctggtcgccaagaacaaccacttcgtcaattccggctccggtgac
cagggcggttcggtgaacgccgtgccgtactcgtacagcctggaccaggcctcctcggtg
aaatccatcgtgcagggcggtgccggtaccggaaaggtcggctga
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