Amycolatopsis sp. YIM 10: YIM_35640
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Entry
YIM_35640 CDS
T06270
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein PbpB
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00550
Peptidoglycan biosynthesis
amyy01100
Metabolic pathways
amyy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YIM_35640 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YIM_35640 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyy01011
]
YIM_35640 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amyy03036
]
YIM_35640 (pbpB)
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
YIM_35640 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
YIM_35640 (pbpB)
Chromosome and associated proteins [BR:
amyy03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
YIM_35640 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Phage_Mu_Gp36
Motif
Other DBs
NCBI-ProteinID:
QFU92287
UniProt:
A0A5P9PX16
LinkDB
All DBs
Position
complement(7520160..7522142)
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AA seq
660 aa
AA seq
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MTGRPRRGPVRVAGTTARARRTSAEAAARGRANPHRTYSATGLRRANGKAVEGSTRSRFA
SVRIILVVLLSIAGLQLVKVQAFDAEALSASAERQRTTPIDIPAQRGSIMDRNGTKLAFS
VENRTLSVNLRLMRKTWTEFAQQHPEKGQNFETRSAAAARFIAQKLPDKTTEAELLEKFR
KPDNFTFLVDDVEPSIADEITDGDNFPEISKEKRAKREYPGGTLAANVVGVAKWQMEDPD
VSKHNLHGLAGLEATWDNELAGTPGRRLVDTEQGGDVVIPGTERDLQPATAGSDLELTLD
ADLQYDLQSKLSDYVAKSRAKGGSAVIMDSKTGEVYALANDRTYDPNDLAKATPDQMNNR
AVTTPFEPGSVNKIVTAVAAIQNGIATPESVLSVPGALRVADHTVRDAWTHGTQNFTTAG
IFGKSSNVGTLLLAQKLGEEPFADMLKKFGLGQRTGIGLPGESPGSVPPRNQWSGTTFGN
LPIGQGLSMTVVQMAGMYQAIANGGLRVEPRVVRAKVNPDGTRVDQPAPKTTQVTTPETA
KTVLDMMRATVQKGKGQNSGTAPTAALEGYQISGKTGTGQQIDPKTNAYSDSLYNITFAG
VLPADNPRFVVGIHLDAPDTTLPAGHSAGPLFHDVASYLAQRYQLPLSDGPSPVVPLVLS
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcaggccgcggcggggcccggtccgggtggccggcaccacggccagggccagg
cggaccagcgcggaggcggcggcacgcgggcgggcgaacccgcaccgcacctactcggcg
accggactgcgccgcgccaacggcaaggccgtcgagggcagcacgcgcagccggttcgcc
tcggtgcggatcatcctggtggtgctgctctccatcgccggactgcagctggtgaaggtg
caggccttcgacgccgaggcgctctcggccagcgccgagcgccagcggaccacgccgatc
gacatcccggcgcagcgcgggtccatcatggaccgcaacggcaccaagctggcgttcagc
gtggagaaccgcacgctgtcggtgaacctgcggctgatgcgcaagacctggaccgagttc
gcccagcagcacccggagaaggggcagaacttcgagacccgctccgccgccgcggcccgg
ttcatcgcgcagaagctgccggacaagacgaccgaggccgagctgctggagaagttccgc
aagccggacaacttcaccttcctggtcgacgacgtggagccctcgatcgccgacgagatc
accgacggcgacaacttcccggagatcagcaaggagaagcgcgccaagcgcgagtacccg
ggcggcacgctggcggccaacgtggtcggcgtggcgaagtggcagatggaggacccggac
gtctccaagcacaacctgcacggcctggccgggctggaggccacctgggacaacgagctg
gccggtacgcccggccgtcgcctggtggacaccgagcagggcggcgacgtggtcatcccc
ggcaccgagcgcgatctgcagccggccaccgcgggctcggacctcgagctgaccttggac
gcggatctgcagtacgacctgcagagcaagctgtcggactacgtggccaagagccgcgcc
aagggcggcagcgcggtgatcatggactcgaagaccggtgaggtctacgcgctggccaac
gaccgcacctacgacccgaacgacctggcgaaggccaccccggaccagatgaacaaccgg
gcggtcaccacgccgttcgaaccgggctcggtgaacaagatcgtcaccgcggtggccgcg
atccagaacgggatcgccaccccggagtcggtgctctcggtgcccggcgcgctgcgcgtg
gccgaccacaccgtgcgcgacgcgtggacgcacggcacgcagaacttcaccaccgcgggc
atcttcggcaagtcgtcgaacgtgggcacgctgctgctggcgcagaagctcggcgaggag
ccgttcgccgacatgctcaagaagttcggtctcggccagcgcaccggcatcggcctgccg
ggtgagagccccggttcggtgccgccgcgcaaccagtggtccggcaccaccttcggcaac
ctgccgatcggccagggtctgtcgatgaccgtggtgcagatggccgggatgtaccaggcg
atcgccaacggcgggctccgggtggagccgagggtggtccgcgccaaggtcaacccggac
ggcacccgcgtggaccagcccgcgccgaagaccacccaggtgaccacgccggagacggcg
aagacggtgctggacatgatgcgggcgaccgtgcagaaggggaagggccagaactccggc
accgccccgaccgcggcgctggagggttaccagatctccggcaagaccggcaccggtcag
cagatcgatccgaagaccaacgcctacagcgattcgctgtacaacatcaccttcgccggg
gtcctgcccgcggacaacccgcgcttcgtcgtcggcatccacctggacgcaccggacacc
acgctgcccgccgggcactcggccggaccgctgttccacgacgtcgcctcgtacctggcg
cagcgctaccagctgccgctctcggacggtccgtcgccggtggtcccgctcgtcctgagc
tga
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