Amycolatopsis sp. YIM 10: YIM_38100
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Entry
YIM_38100 CDS
T06270
Symbol
smtB
Name
(GenBank) HTH-type transcriptional repressor SmtB
KO
K22298
ArsR family transcriptional regulator, zinc-responsive transcriptional repressor
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyy03000
]
YIM_38100 (smtB)
Transcription factors [BR:
amyy03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
YIM_38100 (smtB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_5
HTH_20
HxlR
DUF7343
PaaX
MarR_2
HTH_Cmi2_C
TrmB
SoFic-like_C
HTH_41
Motif
Other DBs
NCBI-ProteinID:
QFU92776
LinkDB
All DBs
Position
8018621..8019010
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AA seq
129 aa
AA seq
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MPTVSPDAAPPGLPEDAEHVHSPARTPSPHAPTPSPATLVEAGELLRALAAPVRISIVLQ
LREGDRCVHELVDSLEVAQPLISQHLRVLKAAGVVHGERRGREVVYRLVDDHLAHIVVDA
VAHVQEGKQ
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgagcccggacgccgcaccacccggtctgccggaggacgccgagcacgtg
cactcgcccgcccggacgccgtccccgcacgcgccgacgccgtccccggccaccctggtc
gaagccggtgagctgctgcgcgcgctggccgccccggtgcgcatctcgatcgtgctgcag
ctgcgcgagggcgaccgctgcgtgcacgagctggtcgactcgctcgaggtggcccagccg
ctgatcagccagcacctgcgggtgctcaaggcggccggcgtggtgcacggcgagcggcgc
ggccgcgaggtggtctaccggctggtcgacgaccacctggcgcatatcgtggtggacgcg
gtggcacacgtgcaggaaggcaagcagtag
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