Amycolatopsis sp. YIM 10: YIM_38620
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Entry
YIM_38620 CDS
T06270
Name
(GenBank) ABC-2 type transporter
KO
K09694
lipooligosaccharide transport system permease protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_38620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_38620
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipooligosaccharide transporter
YIM_38620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
QFU92880
UniProt:
A0A5P9Q095
LinkDB
All DBs
Position
complement(8120137..8120940)
Genome browser
AA seq
267 aa
AA seq
DB search
MTSVMSTGRVVGAWRGAALRVEGYWTWYRRYWRSNLYSTGLQPLFFLAAMGLGFGSQVQP
GAATGGLSYLHYVAPALLVSASMMLAVGESTYPVLSGFKWQKDYLAATATPISPGQVLGG
HLMWVALRLSLAGVVYALMALLLGAWLNAGAVLVVVVGVATGLACSAPVCAFAASTYDET
RFATLFRFVVMPMTLFAGTFFPIEQIPLALRWLAWISPLWHGTELARGVTLGTLDLLPGL
GHAAFLIVLFGVGFASARHYFYKRLVV
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgtgatgtccaccggacgcgtggtcggcgcctggcgcggtgccgcgctgcgg
gtcgagggctactggacctggtaccgccggtactggcggtccaacctgtactccaccggg
ttgcagccgctgttcttcctggccgcgatggggctgggcttcggctcgcaggtgcagccg
ggcgcggccaccggcgggctgtcctacctgcactacgtggcgcccgcgctgctggtgtcg
gcgtcgatgatgctggcggtcggggagtccacctatccggtgctgtcgggattcaagtgg
cagaaggactacctggcggccaccgccacgccgatctcgccggggcaggtactcggcggg
cacctgatgtgggtcgcgctccggctgagcctggccggggtggtctacgcgctgatggcg
ctgctgctgggcgcttggctgaacgcgggcgcggtgctggtggtggtggtcggcgtggcc
accgggctggcctgctcggcgccggtctgcgcgttcgcggcgagcacctacgacgagacc
cggttcgccacgctgttccggttcgtggtgatgccgatgaccctgttcgccggcaccttc
ttcccgatcgagcagatcccgctggcgctgcggtggctggcgtggatctccccgctgtgg
cacggcaccgagctggcgcgcggggtcaccctcggcacgctggacctgttgccggggctc
gggcacgcggccttcctgatcgtgttgttcggcgtgggtttcgcgagcgcgcggcactac
ttctacaaacggctggtggtgtga
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