Amycolatopsis sp. YIM 10: YIM_38650
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Entry
YIM_38650 CDS
T06270
Symbol
ndkA
Name
(GenBank) Nucleoside diphosphate kinase
KO
K00940
nucleoside-diphosphate kinase [EC:
2.7.4.6
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00230
Purine metabolism
amyy00240
Pyrimidine metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01232
Nucleotide metabolism
amyy01240
Biosynthesis of cofactors
Module
amyy_M00049
Adenine ribonucleotide biosynthesis, IMP => ADP,ATP
amyy_M00050
Guanine ribonucleotide biosynthesis, IMP => GDP,GTP
amyy_M00052
Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP
amyy_M00053
Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
amyy_M00938
Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
YIM_38650 (ndkA)
00240 Pyrimidine metabolism
YIM_38650 (ndkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amyy04131
]
YIM_38650 (ndkA)
Enzymes [BR:
amyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.6 nucleoside-diphosphate kinase
YIM_38650 (ndkA)
Membrane trafficking [BR:
amyy04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
YIM_38650 (ndkA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NDK
Motif
Other DBs
NCBI-ProteinID:
QFU92886
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All DBs
Position
complement(8127944..8128351)
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AA seq
135 aa
AA seq
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MSERTLVLVKPDGVKRGLVGEVISRIERKGLTLAQLELRTVERSVAEEHYAEHKDKPFFG
DLVDFITSGPLVAIAVEGTRAISAFRQLAGGTDPVEKATPGTIRGDFALEVQFNLVHGSD
SAESAERELKLWFPN
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgagcgcacccttgttctggtcaagcccgacggcgtcaagcgcggactggtcggc
gaggtcatctcccggatcgagcgcaagggcctgaccctggctcagctggagctgcgcacc
gtcgagcggtcggtggccgaggagcactacgccgagcacaaggacaagccgttcttcggt
gacctggtcgacttcatcacctccggcccgctggtcgccatcgcggtcgagggcacccgc
gcgatctcggcgttccgtcagctcgccggtggcaccgacccggtggagaaggccaccccg
ggcaccatccgcggcgacttcgccctggaggtccagttcaacctggtgcacggctccgac
tccgccgagtccgccgagcgcgagctgaagctctggttcccgaactga
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