Amycolatopsis sp. YIM 10: YIM_39605
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Entry
YIM_39605 CDS
T06270
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00051
Fructose and mannose metabolism
amyy00541
Biosynthesis of various nucleotide sugars
amyy01100
Metabolic pathways
amyy01250
Biosynthesis of nucleotide sugars
Module
amyy_M01006
GDP-D-Rha4N biosynthesis, Fru-6P => GDP-D-Rha4N
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
YIM_39605 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
YIM_39605 (gmd)
Enzymes [BR:
amyy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
YIM_39605 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NmrA
NAD_binding_10
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QFU93060
UniProt:
A0A5P9Q0X7
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Position
complement(8471308..8472342)
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AA seq
344 aa
AA seq
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MSRRALITGITGQDGSYLAEYLLSQGYQVWGLIRGQANPRKSRVSRLVADLSFVDGDLMD
QGSLVSAVDKVQPDEVYNLGAISFVPMSWQQAELVTEINGMGVLRVLEAIRMVSGLNSSQ
RVDVGKQIRFYQASSSEMFGKAAETPQRETTSFHPRSPYGVAKAYGHFITKNYRESFGMY
AVSGMLFNHESPRRGAEFVTRKITLAVAKIKLGLQEKLELGNLDAVRDWGFAGDYVRAMH
LMLQQDEPGDYVVGTGEMHSVRDAVRIAFDHVGLDWRDHVVINPALVRPAEVEILCADTT
RVKAALGWEPSVDFAELMRMMVDSDLAQASREHEYADLLQAANW
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcgagctttgatcaccgggatcaccgggcaggacggttcctaccttgccgag
tacctgctgagccaggggtaccaggtctggggcctgatccgcggccaggccaacccgcgc
aagtcccgggtcagcaggctggtcgccgatctgtcctttgtcgacggtgacctgatggac
cagggcagcctggtctccgcggtggacaaggtgcagccggacgaggtgtacaacctcggt
gccatctcgttcgtgccgatgtcctggcagcaggcggaactggtcaccgagatcaacggc
atgggcgtgctgcgcgtgctggaggcgatccggatggtcagcgggctgaacagctcgcag
cgggtggacgtgggcaagcagatccgcttctaccaggcgtcctcctcggagatgttcggc
aaggcggccgagaccccgcagcgtgagaccaccagcttccacccgcgcagcccgtacggc
gtggcgaaggcctacgggcacttcatcaccaagaactaccgcgaatccttcggcatgtac
gcggtttccggcatgctgttcaaccacgagtcaccgcgccggggtgcggagttcgtcacc
cgcaagatcaccctcgccgtcgcgaagatcaagctgggcctgcaggagaagctcgaactg
ggcaacctggacgcggtgcgcgactggggcttcgccggggactacgtgcgcgcgatgcac
ctgatgctgcagcaggacgagccgggcgactacgtggtcggcaccggtgagatgcactcg
gtgcgtgacgccgtgcggatcgccttcgaccacgtcggcctggactggcgcgaccacgtg
gtgatcaatccggcgctggtgcgcccggccgaggtggagatcctctgcgccgacaccacc
agggtcaaggccgccctcggctgggagccgtcggtggacttcgccgagctgatgcggatg
atggtcgactccgacctcgcgcaggcgtcgcgggagcacgagtacgccgacctgctgcag
gccgccaactggtga
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