Amycolatopsis sp. YIM 10: YIM_39645
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Entry
YIM_39645 CDS
T06270
Symbol
cyc2
Name
(GenBank) Germacradienol/geosmin synthase
KO
K10187
germacradienol/geosmin synthase [EC:
4.2.3.22
4.2.3.75
4.1.99.16
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00909
Sesquiterpenoid and triterpenoid biosynthesis
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
YIM_39645 (cyc2)
Enzymes [BR:
amyy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.16 geosmin synthase
YIM_39645 (cyc2)
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.22 germacradienol synthase
YIM_39645 (cyc2)
4.2.3.75 (-)-germacrene D synthase
YIM_39645 (cyc2)
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Gene cluster
GFIT
Motif
Pfam:
Terpene_syn_C_2
Terpene_synth_C
Motif
Other DBs
NCBI-ProteinID:
QFU93068
UniProt:
A0A5P9PXF7
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Position
8481801..8484011
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AA seq
736 aa
AA seq
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MQAFTLPEFYMPYPARLNPHLERTRAHSMQWAKDMGMLDAPTPGGGLVWDEPALAKMDYA
LMCAYTHPDCDGPALDLITDWYVWVFFFDDHFLEEFKYSRDLTGAKAHLDHLELFMTDDP
PEPVNPAEAGLKDLWARTIPKMSDDWRRRFVTSTHNLMVESMWELDNINRGRIANPIEYV
QMRRRVGGAPWSANLVECVAAEVPGALAATRPLEVLRDTFSDAVHLRNDLFSYQREVQEE
GENSNAVLVFEEFFGCSTQEAAELVNDLLTSRLQQFENTALTEVPDLLAATGTPPHEALA
VAAYVKGLQDWQAGGHEWHERSSRYMNGSQNEGSPLGGPTGLGTSASRLVFAPGARTWVR
QHSHVPRQPVGPLPVPELYMPFPIHTSPNLPDSREHTAAWAREMGMFDPVSELGGASVWD
ERRMRGIDLAHCAAMIHADATPEQLDLSSDWLTWGTYGDDLYPLLDPATARACNARLSLF
MPEPGAPTPEAESALERGLADLWRRTAGPMPDAHRQEFREAVEEMTASWVWEVDNQAQNR
IPDPIDYVEMRRKTFGSDMTAALAKLARPVQVPPEVYHHRTMHELETAAQDYACFANDLY
SYQKEIEFEGEVHNLVLVVENFLGVDRFRAAEFVAKLMKARMEEFEHIVAGELGLMCDEL
DLTDEVRRALIGHAEHLKDWMSGILEWHRKCVRYTEPELKRVRGDSTTSTPPVDFSFPPT
GLGTSAARIRDAVASR
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcaccctgcccgagttctacatgccgtacccggccaggttgaacccccac
ctcgagcgcacccgcgcgcacagcatgcagtgggccaaggacatgggcatgctcgacgcg
cccacccccggcggcggcctggtctgggacgagcccgccctcgccaagatggactacgcg
ctcatgtgcgcctacacccacccggactgcgacggacccgcactcgacctcatcaccgac
tggtacgtctgggtcttcttcttcgacgaccacttcctcgaagagttcaagtactcccgc
gacctcaccggcgcgaaggcccacctcgaccacctcgaactgttcatgaccgacgacccg
cccgaaccggtgaaccccgccgaggccgggctcaaggacctctgggcccgcacgatcccc
aagatgtccgacgactggcgacgccggttcgtcaccagcacgcacaacctgatggtcgag
tccatgtgggaactcgacaacatcaaccgcgggcgcatcgcgaacccgatcgagtacgtg
cagatgcgccgccgcgtcggcggggcgccgtggtcggcgaacctggtcgagtgcgtggcg
gccgaggtgccgggcgcgctcgccgccacccggccgctggaggtcctgcgcgacaccttc
tccgacgccgtccacctgcgcaacgacctgttctcctaccagcgcgaggtccaggaggaa
ggcgagaactccaacgcggtcctggtcttcgaggagttcttcggctgctccacgcaggaa
gccgcggagctggtcaacgacctgctcacctcccgactccagcagttcgagaacaccgcg
ctcaccgaagtccccgaccttctcgccgccaccggcaccccgccgcacgaggcgctcgcc
gtcgccgcctacgtcaaggggttgcaggactggcaggccggcgggcacgagtggcacgag
cgctccagccgctacatgaacggctcccagaacgaaggttccccgctcggcgggccgacg
gggctgggcacctcggcgagcaggctcgtcttcgcgcccggcgcgcgcacctgggtccgc
cagcactcgcacgtgccacggcagccggtcggcccgttgccggtgcccgagctgtacatg
ccgttccccatccacaccagcccgaacctgcccgactcccgcgagcacaccgccgcgtgg
gccagggagatgggcatgttcgacccggtctccgaactcggcggtgcctcggtgtgggac
gagcgccggatgcgcgggatcgatctcgcccactgcgccgcgatgatccacgccgacgcc
acgcccgagcagctcgacctgtcctcggactggctcacctggggcacctacggcgacgac
ctctacccgctgctcgacccggctaccgcacgcgcctgcaacgcgcggctttccctgttc
atgcccgaacccggtgccccgacgcccgaagcggagagcgcgctcgaacgcggcctcgcc
gacctctggcggcgcaccgcggggccgatgccggacgcgcaccgccaggagttccgcgag
gccgtcgaggagatgaccgcgagctgggtgtgggaagtggacaaccaggcgcagaaccgg
atcccggacccgatcgactacgtggagatgcggcgcaagaccttcggctcggacatgacc
gcggcactggcgaaactggccaggcccgtacaggtgccgccggaggtctaccaccaccgc
accatgcacgaactggaaaccgccgcccaggactacgcctgcttcgccaacgacctgtac
tcgtaccagaaggagatcgagttcgagggcgaggtgcacaacctcgtactggtggtggag
aacttcctcggcgtcgaccggttccgggccgccgagttcgtcgcgaagctgatgaaggcg
cgcatggaggagttcgagcacatcgtcgcgggagaactgggcctcatgtgcgacgaactg
gacctcaccgacgaggtgcgccgcgcgctgatcgggcacgccgagcacctcaaggactgg
atgtccggaatcctcgaatggcaccgcaagtgcgtgcgctacaccgagccggagctgaag
cgcgtccgcggagacagcaccaccagcaccccgccggtcgacttctcgttcccgcccacc
ggcctgggcacctccgccgcccggatccgggacgcggtggcgagcaggtga
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