Amycolatopsis sp. YIM 10: YIM_39870
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Entry
YIM_39870 CDS
T06270
Symbol
rbsB5
Name
(GenBank) D-ribose-binding periplasmic protein precursor
KO
K10439
ribose transport system substrate-binding protein
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
amyy02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_39870 (rbsB5)
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
YIM_39870 (rbsB5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_39870 (rbsB5)
Transporters [BR:
amyy02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
YIM_39870 (rbsB5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
VIT_2
Motif
Other DBs
NCBI-ProteinID:
QFU93113
UniProt:
A0A5P9PY70
LinkDB
All DBs
Position
complement(8532311..8533345)
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AA seq
344 aa
AA seq
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MSKNLIRAAAAVLLLTVSACGSTKDSAAPAGGGGQGGTVGATVPLLTSPFWQAYNNYVPQ
MAAGEGVEILPTVNANSDPTKLITDLNNLLNQGVKGLVVTPLDSAAVVAGLEQAERKGVP
VVAVDVAPEGGKVAIVVRADNKAYGVKACEHIGGKVKEGKVVQIMGDLASVNGRERSEAF
RDCVKTKFPALQVLEVPAEWKADKAASGLEGVLTSNPDVKAVYMQAGGTYLAPTVQALQR
KNLFFPVGDPKHVVLVSNDGIPQELEAIRKGELDATVSQPADDYAKYGLHYVKRAMAGEV
FKPGPTDHGSVIVETRPGILEDQLPAPVVTKDNVDDQGLWGNQL
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaagaacctgatcagggcggcggccgcggtgctcttgctgaccgtgagcgcttgt
ggctccacaaaggatagtgccgctccggcgggcggtggcgggcagggcggcacggtcggc
gccacggtgccgctgctgacctcgccgttctggcaggcttacaacaactacgtgccgcag
atggccgccggtgaaggcgtcgagatcctgccgacggtcaacgccaacagcgatccgacc
aagctcatcaccgatctgaacaacctgctcaaccagggcgtcaaggggctggtggtgacg
ccgctggactccgcggccgtggtcgccggactggagcaggccgagcgcaagggcgtgccg
gtggtcgcggtggacgtggcgcccgagggcggcaaggtggccatcgttgtccgcgcggac
aacaaggcctacggcgtcaaggcgtgcgagcacatcggcggaaaggtcaaggagggcaag
gtcgtccagatcatgggtgatctcgcctcggtgaacgggcgcgagcgctcggaagccttc
cgcgactgcgtgaagaccaagttcccggcgttgcaggtgctcgaggtcccggcggagtgg
aaggcggacaaggccgcctccggcctggagggcgtgctcacctcgaacccggacgtcaag
gcggtgtacatgcaggcgggcgggacctatctggcgccgaccgtgcaggcgttgcagcgc
aagaacctcttcttcccggtcggcgacccgaagcacgtggtgctggtcagcaacgacgga
attccgcaggagctggaagcgatccgcaagggggagctggacgccacggtctcccagccc
gccgacgactacgccaagtacggcctgcactacgtgaagcgggcgatggccggtgaggtg
ttcaagccgggcccgaccgatcacggcagcgtgatcgtggaaacccggcccggcatcctg
gaggaccagctgcccgcgcccgtggtgaccaaggacaacgtggacgaccagggcctgtgg
ggcaaccagctgtga
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