Amycolatopsis sp. YIM 10: YIM_42245
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Entry
YIM_42245 CDS
T06270
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
Organism
amyy
Amycolatopsis sp. YIM 10
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
ResIII
adh_short
Motif
Other DBs
NCBI-ProteinID:
QFU93585
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Position
9092412..9094154
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AA seq
580 aa
AA seq
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MRAGTREAITLTASENHDENITTGSDPVALEHSETGLPETDPSHPLQAGAPVEPEAPTFA
EFGVRPEIVRALAESGIERTFAIQSLTLPLAMAGDDLIGQARTGMGKTLGFGVPLLHRIV
TPGDGTPQALIVVPTRELCLQVARDLTDAGKHLGIRTLAIYGGRPYEPQIAALRKGIDVV
IGTPGRLLDLAEQKHLVLGKVRNLVLDEADEMLDLGFLPDIERILGMVPDERQTMLFSAT
MPGPIITLARTFLTQPTHIRAEENDAGAVHERTTQFIYRAHSLDKTELIAKVLQAEGRGL
CMIFTRTKRTAQKVADELAERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAAR
GIDVVDVTHVINYQTPEDEKTYVHRIGRTGRAGKTGVAVTLVDWDDEARWKLISDTLGLD
MPEPVETYSTSKHLFSDLGIPEDASGRLPLAKRTRAGLSAEPEENLGGKRRGRSETESTV
KRTRRPRRRTRGGADAAAEIEAADAAKTSGEAPADGKTEDRPRRRRTRGAGGSKPNGDAS
ATNEKPESAAGENGERPARRRRRRRAGAPANTADTPASAE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgctggtacgagagaggcgatcaccctgaccgcaagcgaaaaccacgacgagaac
attactaccggtagcgatccggtcgcgctggagcacagcgagaccggcctgccggagacc
gacccgtcccacccgctccaggccggtgccccggtcgagccggaagctcccacgttcgcc
gagttcggcgtccgcccggagatcgtgcgcgcactggccgagagcggcatcgagcgcacc
ttcgccatccagtcgctgaccctgccgctggcgatggccggcgacgacctgatcggccag
gcccgcaccggcatgggcaagacgctgggcttcggcgtgccgctgctgcaccggatcgtc
acccccggcgacggcaccccgcaggcgctgatcgtggtgccgacccgcgagctgtgcctc
caggtcgcccgcgacctcaccgacgccggcaagcacctgggcatccgcacgctggccatc
tacggcggccgcccgtacgagccgcagatcgccgccctgcgcaagggcatcgacgtggtc
atcggcacgccgggccgcctgctcgacctcgccgagcagaagcacctggtgctgggcaag
gtccgcaacctggtgctggacgaggccgacgagatgctcgacctcggcttcctgccggac
atcgagcgcatcctcggcatggtcccggacgagcgccagaccatgctcttctcggccacc
atgccgggcccgatcatcaccctggccaggaccttcctgacccagccgacgcacatccgc
gccgaggagaacgacgccggcgcggtgcacgagcgcaccacccagttcatctaccgggcg
cactcgctggacaagaccgagctgatcgcgaaggtgctgcaggccgagggccgcggcctg
tgcatgatcttcacccgcaccaagcgcaccgcgcagaaggtcgccgacgagctggccgag
cgcggcttcgccgccgcggccgtgcacggtgacctcggccagggcgcccgtgagcaggcg
ctgcgcgcgttccgctccggcaaggtcgacgtgctcgtcgccaccgatgtcgccgctcgc
ggcatcgacgtcgtcgacgtcacgcacgtgatcaactaccagacgcccgaggacgagaag
acctacgtccaccgcatcggccgcaccggccgcgccggcaagaccggcgtcgcggtgacc
ctggtcgactgggacgacgaagcccgctggaagctcatctcggacacgctcggcctggac
atgccggagccggtggagacctactccacctcgaagcacctgttcagcgacctcggtatc
ccggaggacgcctcgggcaggctgccgctggccaagcgcacccgcgccgggctgtcggcc
gagccggaggagaacctcggcggcaagcgccgcggtcgctccgagaccgagtccacggtc
aagcgcacccgccgtccgcgtcgccgcacccgcggcggagccgacgcggccgccgagatc
gaggccgctgacgccgccaagaccagcggtgaggccccggccgacggcaagaccgaggac
cggccgcgccgccgccgcacccgtggtgccggtggcagcaagcccaacggggacgcctcg
gccaccaacgagaagcccgaatccgcggccggggagaacggggagcgcccggcgcgccgc
cgtcgccgccgccgcgccggtgccccggccaacacggccgacacaccggcttcggcagaa
tga
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