Amycolatopsis sp. YIM 10: YIM_42480
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Entry
YIM_42480 CDS
T06270
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K16012
ATP-binding cassette, subfamily C, bacterial CydC
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
YIM_42480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyy02000
]
YIM_42480
Transporters [BR:
amyy02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
YIM_42480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_membrane
AAA_16
AAA_22
AAA_29
AAA_30
T2SSE
AAA_19
MobB
AAA_5
Pox_A32
AAA_18
RsgA_GTPase
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QFU93631
LinkDB
All DBs
Position
9133319..9134968
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AA seq
549 aa
AA seq
DB search
MRLSKLFWAALLATAAELAGLALMGIAAWLLLRAAEQPPISALTVAIVAVRTLALLRGSL
RYAERLAGHEVVLSAIGEVRERVYRALLPHRDQRSSDADLLARVVSDVDAAQDAVLRCLL
PAGVAALTGTVAVVVSAFFSINAAIALATGLVLGGVLLPWCCARLTAKAADRSAAARAAV
GEHAVELVRGAEELLAYGAEKRALTRAATAVGELTSTERTRWVNALAAAGVAMQLGTTLA
VCLVAGVSIPLTAALALGTLAAFEVVLPLPAAAQRWVEARASIARLRALLAEPAPEPGTA
DVPDGPVHLRLRGATARDLPLTDLDLPQGSRIALIGPSGSGKTTVLHVLLGLLEPRAGEV
TVNGRALDEFAPGQLPRIISGATAHAHIFRSSVKENLLLAAPEATDAELRRACEAADLDC
DWEHDATTLSGGQRRRLMLARAVLARPRVLVLDEPTEGLDPAHARRVLDGVLRACPGATV
VLATHDLAEAEANGFEHRRPVRDEDLGDVGQPFARDLHELGQLPAGLVDPAAGERGAEDL
PRHHAQLQQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgagcaagctgttctgggccgcgttgctcgcgacggcggccgaactcgccggg
ctcgcgctgatgggcatcgccgcgtggctgctgttgcgcgcggccgagcaaccgccgatc
tccgcactgaccgtggcgatcgtcgcggtgcgcacgctcgccctgctgcgtggttccctg
cgttacgccgaacgcctcgccgggcacgaggtcgtgctgtcggcgatcggtgaggtgcgg
gaacgggtataccgcgcgctgctgccgcaccgcgatcagcgttcgtccgacgccgatctc
ctcgcccgcgtggtgtccgatgtggacgccgcacaggacgccgtgctgcgctgcctgctt
cccgccggggtcgccgcgctgaccggcacggtcgcggtggtggtcagcgcgttcttctcg
atcaacgccgccatcgcgctcgccaccgggctcgtcctcggcggtgtcctgctgccgtgg
tgctgtgcccggctgaccgccaaggccgcggaccggagcgcggcggcgcgggcggccgtc
ggcgagcacgccgtcgaactggtgcgaggcgcggaggagctgctcgcctacggggccgaa
aagcgcgcgctgaccagggccgcgaccgccgtcggcgaactcacgtcgaccgagcgcacc
cgctgggtgaacgcgctcgccgcggcgggcgtggccatgcaactgggcaccacgctggcg
gtctgcctggtcgcgggcgtgtccatcccgctgaccgccgcactcgcgctcggcacgctc
gcggcgttcgaagtggtgctgccgttgcccgccgccgcccagcgctgggtggaagctcgc
gcgtcgatagcccgcctgcgcgcgctgctggccgaaccggctccggaacccggcaccgcc
gatgttcccgacggcccggtccacctccggctgcgtggcgccaccgcacgggatcttccg
ttgacggacctggatctgccgcaaggcagccgaatcgcgctcatcgggccgagcggttcc
ggcaagaccaccgtgctgcacgtactgctcggcctgctcgaaccgcgggcgggcgaggtc
accgtgaacgggcgcgcactcgatgaattcgccccggggcaactaccccggatcatcagc
ggagccaccgcgcacgcgcacatcttccggtccagtgtcaaggaaaacctgctgctggcc
gccccggaagcgaccgacgccgaactgcggcgtgcctgcgaagccgcggacctggactgc
gactgggaacacgacgcgaccacgctttccggcgggcagcggcgacggctgatgctggca
cgcgcggtgctggcccgcccacgcgtgctggtgctcgacgaaccgaccgagggcctcgac
ccggcacacgccaggcgcgtgctcgacggggtcctacgggcgtgccccggggccaccgtg
gtgctggccacgcacgacctcgccgaggccgaggcgaacggcttcgagcatcggcggccg
gtccgcgacgaggacctcggtgacgtcgggcagccattcgcccgagacctgcacgaactg
ggtcagctccccgccggcctggtcgatcccgcagcgggcgagcgcggtgccgaggatctg
ccgcgccatcacgcccagttgcagcagtga
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