Amycolatopsis sp. YIM 10: YIM_42995
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Entry
YIM_42995 CDS
T06270
Symbol
accC2
Name
(GenBank) Biotin carboxylase
KO
K11263
acetyl-CoA/propionyl-CoA/long-chain acyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.4.1.-
6.3.4.14
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00061
Fatty acid biosynthesis
amyy00074
Mycolic acid biosynthesis
amyy00280
Valine, leucine and isoleucine degradation
amyy00620
Pyruvate metabolism
amyy00630
Glyoxylate and dicarboxylate metabolism
amyy00640
Propanoate metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
amyy01212
Fatty acid metabolism
Module
amyy_M00082
Fatty acid biosynthesis, initiation
amyy_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
YIM_42995 (accC2)
00630 Glyoxylate and dicarboxylate metabolism
YIM_42995 (accC2)
00640 Propanoate metabolism
YIM_42995 (accC2)
09103 Lipid metabolism
00061 Fatty acid biosynthesis
YIM_42995 (accC2)
00074 Mycolic acid biosynthesis
YIM_42995 (accC2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
YIM_42995 (accC2)
Enzymes [BR:
amyy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
YIM_42995 (accC2)
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
YIM_42995 (accC2)
6.4.1.3 propionyl-CoA carboxylase
YIM_42995 (accC2)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
HlyD_D23
RnfC_N
DUF6181
GCV_H
GP38
Motif
Other DBs
NCBI-ProteinID:
QFU93734
UniProt:
A0A5P9PZY1
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Position
9243076..9244875
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AA seq
599 aa
AA seq
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MPEAASASQGGPVTKVLVANRGEIAVRVIRAAKDAGIASVAVYADPDRDAPHVRLADEAF
ALGGNTAAESYLVFDKLLDVAARSGADSVHPGYGFLSENADFAQAVLDAGLTWIGPRPQA
IRDLGDKVTARHIALKAGAPLVPGTKEPVAGAEEIIAFAEEHGLPVAIKAAFGGGGRGLK
VARTIEEIPELFESATREAVAAFGRGECFVERYLDKPRHVEAQVLADQHGNVIVVGTRDC
SLQRRHQKLVEEAPAPFLSDEQRATIHSSAKAICAEARYSGAGTVEYLVGTDGTISFLEV
NTRLQVEHPVSEETTGLDLVREQFAIARGEKLRFTEDPEPRGHSIEFRINGEDAGRNFLP
APGTVSNFVAPSGPGVRVDSGVESGSVIGGQFDSMLAKLIVTGSDRENALERSRRALDEL
VAEGLATVIPFHRAIVRDPAFIGDGKQFSVHTRWIETEFDNQIEPFTSPAEVEDEEQPRQ
NVVVEVGGRRLEVSLPGNLALGGGGGGGAAVAKAKPRKRSGGGKTAVSGDAVTAPMQGTI
VKVAVEEGQRVEAGELIVVLEAMKMENPVTAHKSGTVTGLTAEVGAAVSQGTALLELKD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgaagcagccagcgcgagccagggcggaccggtgacgaaggtgctggtcgccaac
cgcggtgagatcgcggtacgggtcatccgagcagccaaggacgcgggcatcgccagcgtc
gcggtctacgccgatcccgatcgcgacgccccgcacgtccggctcgccgacgaagctttc
gcactcggtgggaacaccgcggcggaaagctacctggtcttcgacaagctgctcgacgtc
gccgcccgctccggcgccgactcggtgcaccccggttacggcttcctctccgagaacgcc
gacttcgcgcaggccgtgctggacgccgggctgacctggatcggcccgcgcccgcaggcc
atccgcgacctcggtgacaaggtgaccgcgcggcacatcgcgctcaaggcgggcgcgccg
ctggtgccgggcaccaaggagccggtggccggggccgaggagatcatcgccttcgccgag
gagcacgggctgccggtggccatcaaggccgcgttcggcggtggtggccgcgggctgaag
gtggccaggaccatcgaggagatccccgagctgttcgagtcggccacccgcgaggcggtg
gcggcgttcggccgtggcgagtgcttcgtggagcgctatctggacaagccgcgccacgtc
gaggcgcaggtgctggccgaccagcacggcaacgtgatcgtggtcggcacccgtgactgc
tcgctccagcggcggcaccagaagctggtggaggaggcccccgcgccgttcctctccgac
gagcagcgcgccaccatccacagctccgccaaggccatctgcgccgaagcgcggtactcc
ggtgccggcacggtcgagtacctggtcggcaccgacggcaccatctccttcctggaggtg
aacacccggctccaggtggagcacccggtctccgaggagaccaccggcctcgacctggtg
cgcgagcagttcgccatcgcgcgcggggagaagctgcgcttcaccgaggaccccgagccg
cgcgggcactcgatcgagttccggatcaacggcgaggacgccgggcggaacttcctcccg
gctcccggcacggtgtccaacttcgtcgcgccgagcggtccgggcgtccgggtcgactcg
ggtgtggagtccggcagcgtgatcggcgggcagttcgactcgatgctggcgaagctgatc
gtcaccggttccgaccgcgagaacgcgctggagcgcagccgccgcgcgctggacgagctg
gtcgccgagggattggccacggtgatcccgttccaccgcgcgatcgtgcgcgacccggcg
ttcatcggggacggcaagcagttcagcgtgcacacccgctggatcgagaccgagttcgac
aaccagatcgagccgttcacctcgcccgccgaggtcgaggacgaggagcagccgcggcag
aacgtggtggtcgaggtcggcgggcggcggctggaggtcagcctgcccggcaacctggca
ctcggcggcggtggtggcggtggcgccgcggtggccaaggccaagccgcgcaagcgcagc
ggtggcggaaagaccgcggtcagcggtgacgcggtgaccgcgccgatgcagggcaccatc
gtcaaggtcgcggtcgaagagggccagcgggtcgaggcgggcgagctgatcgtggtgctg
gaagcgatgaagatggagaacccggtcaccgcacacaagtcgggcacggtcaccggcctg
accgccgaagtgggcgccgcggtctcccagggcaccgcactcctcgaactgaaggactag
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