Amycolatopsis sp. YIM 10: YIM_43320
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Entry
YIM_43320 CDS
T06270
Symbol
sdhA2
Name
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00020
Citrate cycle (TCA cycle)
amyy00190
Oxidative phosphorylation
amyy00650
Butanoate metabolism
amyy00720
Other carbon fixation pathways
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
Module
amyy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amyy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YIM_43320 (sdhA2)
00650 Butanoate metabolism
YIM_43320 (sdhA2)
09102 Energy metabolism
00190 Oxidative phosphorylation
YIM_43320 (sdhA2)
00720 Other carbon fixation pathways
YIM_43320 (sdhA2)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
YIM_43320 (sdhA2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Thi4
Pyr_redox_2
FAD_oxidored
HeLo
DUF6020
GIDA
Motif
Other DBs
NCBI-ProteinID:
QFU93799
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All DBs
Position
9318309..9320096
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AA seq
595 aa
AA seq
DB search
MQFHKYDVVIVGAGGAGMRAAIEAGQRTRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLTDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAAVRRACYAADRTGHMILQTLYQNCVKHGIEFYNEFYVLDIAMTDTPDGPKASGA
IAYELATGEIHVFQAKSIVFATGGFGKVFKTTSNAHTLTGDGMGIYFRKGLPLEDIEFYQ
FHPTGLAGLGILLTEGARGEGAILRNESGERFMERYAPTIKDLAPRDIVARSMVLEVLEG
RGAGPNKDYVLLDCTHLGAEVLETKLPDITEFARTYLGVDPVEEPVPVYPTAHYAMGGIP
TNVHGEALRDNNNVIPGLYAAGEVACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYAAG
HEFVELPENPARLVEGMVEHLRTAHGGERVADIRTELQQTMDSNAAVYRTEDTLKQALTD
VQALKERYGRIAVQDKGKRFNTDLLEAIELGFLLDLAEALVVAALARKESRGGHAREDYP
NRDDVNFMRHSMSYKQMPEEEDPDAPLGLTGFLADIRLDYKPVTFTRYEPMERKY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgcagttccacaagtacgacgtggtgatcgtcggggcgggcggcgccggcatgcgcgcc
gccatcgaggcaggccagcgcacccgcaccgcggtgctgaccaagctgtacccgacgcgg
tcgcacaccggtgccgcccagggcggcatgtgcgcggcgctcgccaacgtcgaagaggac
aactgggagtggcacaccttcgacacggtcaagggtggtgactacctcaccgaccaggac
gccgccgaaatcatggccaaggaggccatcgacgcggtgctcgacctggagaagatgggg
ctgccgttcaaccggacgcccgagggcaagatcgaccagcgccggttcggcgggcacacc
cgcgaccacggcaaggccgcggtgcgccgcgcctgctacgccgcggaccgcaccgggcac
atgatcctgcagacgctgtaccagaactgcgtcaagcacggcatcgagttctacaacgag
ttctacgtgctcgacatcgcgatgaccgacaccccggacggcccgaaggcctccggagcc
atcgcctacgagctggccaccggtgagatccacgtcttccaggccaagtccatcgttttc
gccaccggcggcttcggcaaggtcttcaagaccacctcgaacgcgcacacgctgaccggc
gacggcatgggcatctacttccgcaagggcctgccgctggaggacatcgagttctaccag
ttccacccgaccggcctggccgggctgggcatcctgctcaccgagggtgcccgcggtgag
ggcgcgatcctgcggaacgagtcgggcgagcggttcatggagcggtacgcgccgacgatc
aaggacctggcgccacgtgacatcgtcgccaggtcgatggtgctcgaggtgctcgaaggc
cgtggtgccgggccgaacaaggactacgtgctgctggactgcacccacctcggggccgag
gtgctggagaccaagctgccggacatcaccgagttcgcccgcacctatctcggtgtcgac
ccggtcgaggagccggtgccggtgtacccgaccgcgcactacgcgatgggcggcatcccg
accaacgtccacggcgaagcgctgcgggacaacaacaacgtcatccccggcctgtacgcc
gcgggtgaggtcgcctgcgtgtcggtgcacggcgcgaaccgcctcggcaccaactcgctg
ctcgacatcaacgtgttcggccgccgcgccggcatcgccgccgcggagtacgccgccggg
cacgagttcgtggagctgccggagaacccggcgcgcctggtcgagggcatggtcgagcac
ctgcgcaccgcgcacggcggggagcgggtcgccgacatccgcaccgagctgcagcagacg
atggactcgaacgcggcggtctaccgcaccgaggacacgctgaagcaggcgctcaccgac
gtgcaggcgctcaaggagcgctacggccggatcgcggtgcaggacaagggcaagcggttc
aacaccgacctgctcgaggcgatcgagctgggcttcctgctcgacctcgccgaggcgctg
gtggtggccgcgctggcccgcaaggagtcccgcggcgggcacgcgcgtgaggactacccg
aaccgcgacgacgtgaacttcatgcggcactcgatgtcgtacaagcagatgccggaggaa
gaggacccggacgccccgctcgggctgaccggtttcctcgcggacatccggctggactac
aagccggtgaccttcacccggtacgagccgatggagcggaagtactga
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