Amycolatopsis sp. CA-230715: HUW46_00235
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Entry
HUW46_00235 CDS
T10444
Symbol
rcsC_1
Name
(GenBank) Sensor histidine kinase RcsC
Organism
amyz Amycolatopsis sp. CA-230715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Baculo_PEP_C
GAF_3
HATPase_c_3
ATG14
OmpH
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
QWF76855
LinkDB
All DBs
Position
complement(250873..255267)
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AA seq
1464 aa
AA seq
DB search
MAERAAGERSLLDLLEGLKAVRDGDFSRRLPKADDPLMDEMSTVFNGMVDQLARFTSEVT
RVAREVGTDGKLGGQAVVSGVSGTWKALTDSVNAMAGNLTAQVRSIAEVTTAVAKGDLTQ
QITVDVKGEMLELKNTINTMVGQLSSFADEVTRVAREVGSEGRLGGQAEVPGVAGTWRDL
TTSVNFMAGNLTAQVRSIAEVTTAVAKGDLTQKITVDARGEILELKNTINTMVGQLSSFA
DEVTRVAREVGTEGALGGQAQVPGVAGTWRDLTTSVNFMAGNLTGQVRSIAQVATAVAKG
DLTQKITVDARGEILELKNTINTMVGQLSSFADEVTRVAREVGTEGRLGGQADVKGVSGT
WKGLTESVNVMADNLTDQVRSIAEVTTAVANGDLTQKIRVDARGEILELKDTINTMVGQL
SSFADEVTRVAREVGTEGRLGGQADVKGVSGTWKGLTESVNVMADNLTDQVRSIAKVASA
VAQGDLSKKVTVEAKGEVAALAQTINTMVDTLSAFADEVTRVAREVGTDGILGGQARVSD
VAGIWKNLTDNVNSMANNLTNQVRNIAQVTTAVARGDLSRKIDVDARGEILELKTTINTM
VEQLSAFAAEVTRVAREVGSEGRLGGQAEVEGISGTWKRLTENVNGLAGNLTRQVRAIAE
VTSAVARGDLTRTISVEAQGEVAELKDNINAMVQSLRDTTLANQQQDWLNTNLARVPGLI
QGHRDLRVVGAVIMNELTPLVGAQHGTFFLSTSDDGDQRLRLIASYGHYTGAGAPTEFDV
GQSLIGQAARTKRTIVVDQTPPDYVRITSSLGSSAPVNLIVLPIVFEDRVLGVMELASFT
RFTAVQRDFLEQLMEMIGVSVNTIMANARTDALLEESQRLAEELRQRSEELQAQQAKLQR
SNAELGEKAELLARQNRDIEVKNFEIEQARQEIEERAQQLALASKYKSEFLANMSHELRT
PLTSLLILAGVLVQNSTQNLTAKQVEFAKVIQSAGTDLLQLINDILDLSKVEAGKMDIHR
ELFPLQQLLDYVRTTFRPLTVDSGLDFAVTVGEGVPELLFTDEQRLRQVLRNLLSNAVKF
TEEGSVELRVDSVGGASETVVAFTVVDTGIGIDTANLESIFGAFQQADGTTSRKYGGTGL
GLSICREIAHLLGGEILADSTVGEGSTFTLRLPVARFEGDVSPYTAELPAVGPERAMLVV
ESQENSLLTHVARGAVAELDVRVDQVRGTDRAFEMLSSRSYACVVLDLDLPGAAAVTFLK
QLGEGAETITVPVLAHAVGGLSGAEDRILRAHARTHPIEIVSTLDVLRERIWRLLKGEED
QEPVEAAPAERQVTAAQGGKVLLIDDDTRTVFALSGMLELHGFSVVHAPTGREGIDMLLE
NADIDLVLMDVMMPGMDGHATTAAIRGMPRFERLPIIAVTAKAMEGDREKSLASGASDYV
TKPVDAGELLSCMSRWLDAAEPSH
NT seq
4395 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgcgcggcgggcgaacggagcctgctcgacctgttggaaggcctgaaagcg
gtcagggacggggatttcagccgccgcctgccgaaggcggacgacccgctgatggacgag
atgtcgacggtgttcaacggcatggtcgaccagctcgcgcgcttcacctccgaggtgacg
cgcgtggcgcgcgaggtcggcacggacggcaagctcggcgggcaggccgtggtgtccggg
gtgtcgggcacctggaaggcgctcaccgattccgtcaacgcgatggcgggcaacctgacc
gcgcaggtgcgctccatcgcggaggtcaccacggcggtggcgaagggggatctgacccag
cagatcaccgtcgacgtcaagggcgagatgctcgaactgaagaacacgatcaacacgatg
gtgggtcagttgtcgtcgttcgcggacgaggtgacgcgggtggcgcgcgaggtcggcagc
gaggggcggctcggcgggcaggccgaagtgcccggggtggccgggacgtggcgtgatctg
accacgtcggtgaatttcatggcgggcaacctgaccgcgcaggtgcggtccatcgcggag
gtcacgaccgcggtggcgaagggggatttgacgcagaagatcaccgtggacgcgcgcggg
gagatcttggagctgaagaacacgatcaacacgatggtgggtcagttgtcgtcgttcgcc
gatgaggtgacgcgggtggcgcgcgaggtcggcaccgaaggcgcgctcggcgggcaggcg
caggttccgggtgtcgcggggacgtggcgcgacttgaccacgtcggtgaatttcatggcg
ggcaacctcaccgggcaggtgcggtccatcgcgcaggtcgccaccgcggtggcgaagggg
gatttgacgcagaagatcaccgtggacgcgcgcggggagatcttggagctgaagaacacg
atcaacacgatggtgggtcagttgtcgtcgttcgccgatgaggtgacgcgggtggcgcgt
gaggtgggtacggaggggcggctgggtggtcaggctgatgtgaagggtgtttcggggacg
tggaaggggttgacggagtcggtgaacgtgatggccgacaacctgaccgaccaggtccgc
tcgatcgccgaggtgaccacggcggtcgcgaacggggacctgacgcagaagatcagggtc
gacgcgcgcggggagatcttggagctcaaggacacgatcaacacgatggtgggtcagttg
tcgtcgttcgccgatgaggtgacgcgggtggcgcgtgaggtgggtacggaggggcggctg
ggtggtcaggctgatgtgaagggtgtttcggggacgtggaaggggttgacggagtcggtg
aacgtgatggccgacaacctgaccgaccaggtccgctcgatcgccaaggtggccagcgcg
gtcgcgcagggcgatctgtccaaaaaggtcaccgtggaggccaagggcgaggtggccgcg
ctggcgcagaccatcaacacgatggtcgacacgttgtccgccttcgccgacgaggtgacg
cgcgtggcgcgcgaggtcggcacggacggcatcctcggcgggcaggcgcgagtgtccgat
gtggccggtatctggaagaacctcaccgacaacgtcaactcgatggccaacaacctgacc
aaccaggtgcgcaacatcgcgcaggtgaccaccgcggtggcgcgcggcgacctgtcccgc
aagatcgacgtggacgcgcgcggggagatcctcgaactgaagaccaccataaacaccatg
gtggagcagctttccgcgttcgcggccgaggtgacgcgggtggcgcgcgaggtcggcagc
gaggggcggctcggcgggcaggcggaggtcgagggcatttcgggaacctggaagcggttg
accgagaacgtcaacgggctcgccgggaacctgacccgccaggtgcgggcgatcgccgag
gtcaccagcgcggtggcgcgcggcgacctgaccaggacgatttccgtggaggcgcagggt
gaagtcgcggagctgaaggacaacatcaacgcgatggtgcagtcccttcgcgacaccacg
ctggcgaaccagcagcaggactggctcaacaccaacctcgcgcgggtgcccggcctcatc
cagggccaccgcgatctgcgcgtggtcggtgcggtgatcatgaacgagctgaccccgctc
gtcggcgcgcagcacggcacgttcttcctcagcacgtccgacgacggggaccagcggctg
cgcctcatcgccagctacggccactacaccggggccggggcgcccacggagttcgacgtc
gggcagtccctgatcgggcaggccgcgcggacgaagcggacgatcgtggtcgaccagacg
ccgccggactacgtgcggatcacctcgagcctcggttcctcggcgccggtgaacctgatc
gtgctgccgatcgtgttcgaagaccgcgtgctcggcgtgatggaactggcctcgttcacg
cggttcaccgccgtgcagcgggatttcctcgaacagctcatggagatgatcggggtcagc
gtcaacaccatcatggccaacgcgcgcacggacgcgctgctcgaagaatcgcagcggctc
gccgaggaactgcggcagcggtcggaagaactccaggcgcagcaagcgaaactgcagcgg
tcgaacgccgagctgggggagaaggcggaactgctcgcccgccagaaccgcgacatcgag
gtcaagaacttcgaaatcgaacaggcccgccaggagatcgaagagcgcgcgcagcagctc
gcgctcgcgtcgaagtacaagtccgagttcctcgccaacatgtcgcacgagctgcgcacc
ccgttgaccagcctgctcatcctcgccggtgtgctcgtccagaactcgacgcagaacctg
accgcgaagcaggtggagttcgcgaaggtgatccagtccgcgggcaccgatctgctgcag
ctgatcaacgacatcctcgacctgtcgaaggtcgaggcgggcaagatggacatccaccgc
gagctgttcccgttgcagcagctgctcgactacgtgcgcaccacgttccggccgctgacc
gtcgacagtggactcgacttcgcggtgacggtgggcgaaggggtgccggagctgctgttc
accgacgagcagcggctgcggcaggtgctgcggaacctgttgtccaacgcggtgaagttc
accgaggagggcagcgtcgagctgcgcgtcgactcggtcggcggggcgagcgagacggtc
gtcgcgttcaccgtggtggacaccgggatcggcatcgacacggcgaacctcgaatcgatc
ttcggggcgttccagcaggccgacggcaccaccagccggaagtacggcgggacggggctc
gggctgtcgatctgccgcgagatcgcccacctgctcggcggggagatcctcgccgacagc
acggtgggggagggcagcacgttcaccctgcggctccccgtcgcgcggttcgaaggcgac
gtgtcgccgtacacggcggaactgcccgccgtcggcccggaacgggcgatgctcgtggtc
gagtcgcaggagaacagcctgctcacgcacgtggcgcgcggggcggtcgccgaactcgac
gtgcgggtggaccaggtgcgcggcaccgatcgcgcgttcgagatgctgtcctcccggtcg
tacgcctgcgtggtgctcgacctcgacctccccggtgccgccgcggtcaccttcctcaag
cagctcggcgagggcgccgagacgatcaccgttcccgtgctcgcgcacgccgtcggcggc
ctcagcggggcggaggaccgcatcctccgcgcgcacgcgcgcacccacccgatcgaaatc
gtgtccactttggacgttctgcgggagcggatctggcggctgctcaagggcgaggaggac
caggagccggtggaagcggccccggccgaacgccaggtcaccgccgcgcagggcggaaag
gtcctcctgatcgacgacgacacccgcaccgtgttcgcgctgtcgggcatgctcgaactg
cacgggttctccgtggtgcacgccccgaccgggcgcgaggggatcgacatgctgctcgag
aacgccgacatcgacctcgtgctgatggacgtgatgatgccgggaatggacgggcacgcc
accaccgcggccatccgcggcatgccccggttcgaacggctgccgatcatcgcggtcacc
gcgaaggcgatggaaggcgaccgggagaagagcctcgcctccggcgccagcgactacgtc
acgaaacccgtcgacgcgggcgaactcctgtcctgcatgagccggtggctggacgccgcg
gagccctcgcactag
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