Amycolatopsis sp. CA-230715: HUW46_00399
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Entry
HUW46_00399 CDS
T10444
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00470
D-Amino acid metabolism
amyz00550
Peptidoglycan biosynthesis
amyz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUW46_00399 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUW46_00399 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amyz01011
]
HUW46_00399 (murD)
Enzymes [BR:
amyz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HUW46_00399 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amyz01011
]
Precursor biosynthesis
Amino acid ligase
HUW46_00399 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
TrkA_N
AdoHcyase_NAD
NAD_binding_7
2-Hacid_dh_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
QWF77019
LinkDB
All DBs
Position
complement(421423..422820)
Genome browser
AA seq
465 aa
AA seq
DB search
MELAGKRVLVAGAGVTGKSVVAALSTLDARITVTDGDAARLSELDGLGAELAPGLAEPPD
GTDLVVTSPGWRPSAPLLVAAREAGVEVIGDVELAWRVGQGLPDPPKWLAVTGTNGKTTT
VGMLEAILRAGGADAVACGNVGYAVLDAVRGGHQVLAVELSSFQLHWSNTLAPHASVVLN
LAEDHIDWHGSLAEYAAAKGTIHARSATVVANADDEMSVRLAAEHGAPEANRVSFGLGMP
RAGELGLVEDLLVDRAFVDDPAHAAEELCALADVRPPGPHNVANALAAAALARAYGVPAD
AVRKGLHDFTPGAHRAVEVAEIGGVRYVNDSKATNPHAAAGSLLAHPDVVWIAGGQLKGA
SVDELVAAVGGRLRGVVLLGVDSPVIGAAVARHAPDVPVRQVSSGDDEAMTAAVSAARAM
ARPGDVVLLAPAAASLDMFRNYAHRGDAFARAVDALKAETQHDGG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaactggccgggaaacgggtactcgtcgcgggcgccggggtcaccgggaagtcggtg
gtcgccgcactgtccactctggacgcccggatcacggtcaccgacggcgacgcggcccgt
ctgtccgaattggacggtctgggcgcggagctggcgccgggcctggccgagccgcccgac
ggcaccgatctggtggtgaccagccccggctggcggccgtcggcgccgctgctggtggcc
gcgcgcgaagcgggtgtcgaggtgatcggcgacgtcgaactcgcctggcgcgtcgggcag
ggcctgccggatccgccgaagtggctcgcggtcaccggcaccaacggcaagaccaccacg
gtcggcatgctcgaagcgatcctgcgcgcgggcggtgccgacgcggttgcctgcgggaac
gtcggctacgcggtgctcgacgcggtgcgcggcgggcaccaggtgctcgcggtcgagctg
tcgagcttccagctgcactggtcgaacacgctcgcgccgcacgcctcggtggtgctcaac
ctggccgaggaccacatcgactggcacggctcgctcgcggaatacgccgccgcgaagggc
acgatccacgcccgctcggccaccgtggtcgccaacgccgacgacgagatgagcgtgcgg
ctcgcggccgaacacggtgcgccggaagcgaaccgggtctccttcggcctgggcatgccc
cgggcaggggaactgggcctggtcgaggatctgctggtggaccgggcgttcgtcgacgat
ccggcgcacgccgccgaagagctgtgcgcgctcgccgacgtccgccctcccggcccgcac
aacgtcgcgaacgcgctcgccgccgccgcgctggcccgcgcctacggcgtgcccgccgac
gcggtccgcaaggggctgcacgacttcacccccggcgcgcaccgcgcggtcgaggtcgcc
gagatcggcggggtccgctacgtcaacgattccaaggccaccaacccgcacgcggccgcg
ggttcgctgctggcgcacccggacgtggtgtggatcgcgggcggtcagctcaagggcgca
tcggtggacgaactcgtcgcggcggtcggtggcaggctgcgcggagtcgtgctactcggt
gtggattcgcccgtgatcggtgccgcggttgcgcgacacgcgccggatgtcccggtccgg
caggtgtcttcgggtgacgatgaggccatgactgcggcggtgagtgcggccagggccatg
gcgcgccctggtgacgtcgtgctgctcgcgcccgcggccgcctcgctggacatgttccgg
aactacgcgcatcgcggtgacgcgttcgcgcgggcggtcgacgctctgaaggcggagacc
cagcatgacggcggttga
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