Amycolatopsis sp. CA-230715: HUW46_00480
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Entry
HUW46_00480 CDS
T10444
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyz03016
]
HUW46_00480 (truB)
Enzymes [BR:
amyz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HUW46_00480 (truB)
Transfer RNA biogenesis [BR:
amyz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUW46_00480 (truB)
Prokaryotic type
HUW46_00480 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QWF77100
LinkDB
All DBs
Position
complement(504933..505775)
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AA seq
280 aa
AA seq
DB search
MTSHDVVARVRRIMGTRKVGHAGTLDPMATGVLVLGIERATKLLGHLALDRKTYLATIVL
GSSTTTDDADGEQLAEASADAVAAVTDEAVAAGIATLTGDIQQVPSAVSAVKVDGKRAYA
RVRAGEELDLPPRPVTVYRFDLLAARREGGTIELDAVVDCSSGTYVRALARDLGAGLGVG
GHLGALRRTTVGPFALAAARTLEQLEEKPELSFSLDEAVAKAFPRRDVGTGLAKAVQYGQ
RVPPAGIDGTYGVFDPNGRVLALAVDEGGVARSVVVLSPA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccacgacgtcgtcgcgcgcgtccggcgcatcatgggcacccgcaaggtcggc
cacgccggcacgctcgacccgatggccaccggcgtgctcgtgctcggcatcgaacgggcc
accaagctcctcgggcacctcgcgctggaccgcaagacctacctcgcgacgatcgtcctc
ggctcctcgaccaccaccgacgacgccgacggcgagcaactcgccgaagcgtcggccgac
gcggtcgccgcggtgaccgacgaggccgtcgccgccgggatcgcgacgctgaccggggac
atccagcaggtgcccagcgcggtcagcgcggtcaaggtcgacggcaagcgcgcctatgcc
cgcgtccgcgcgggcgaggagctcgatctgccgccgcgcccggtcacggtgtaccggttc
gacctcctcgccgctcgccgcgaagggggcacgatcgaactcgacgcggtagtggactgc
tcgtcgggcacctacgtgcgcgcgctggccagggatctcggcgccgggctcggcgtcggc
ggccacctcggcgcgttgcggcgcaccaccgtcggcccgttcgcgctcgccgccgcgcgc
acgctcgaacagctcgaagagaagccggaactgtccttttcgctcgacgaggcggtcgcg
aaggctttcccgcgccgcgacgtcggcaccgggctcgccaaggcggtccaatatggacag
agggtgccgccggccgggatcgacggcacctacggggtgttcgatccgaacggccgcgtg
ctggcgctcgccgtcgacgaaggcggcgtggcccgttcggtcgtcgtgctcagcccggca
taa
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