Amycolatopsis sp. CA-230715: HUW46_00844
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Entry
HUW46_00844 CDS
T10444
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyz03021
]
HUW46_00844 (sigB)
Transcription machinery [BR:
amyz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUW46_00844 (sigB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
Motif
Other DBs
NCBI-ProteinID:
QWF77452
UniProt:
A0A975MTA6
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All DBs
Position
876639..877682
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AA seq
347 aa
AA seq
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MSVQTLERETRGIRQRTVPKQATEPALDSSITTLPAESADLDAQSPAADLVRVYLNGIGK
TALLTAADEVELAKRIEAGVFAAHMLDTAENLTPKRRSELSALVRDGHVAKNHLLEANLR
LVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYSKGFKFSTYATWWIRQAITRGMAD
QGRTIRLPVHLVEQVNKLARIKRDLHQQLGREATNEELAAESGIAAEKVSDLLDHARDPV
SLDMPVGTEEDAPLGDFIEDSEATDAESAVISGLLQDDLRRVLATLDDREQHVIRLRYGL
DDGQPRTLDQIGKHFGLSRERVRQIEREVMSKLRQGERADRLRAYAS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccagactctcgagcgcgagactcgcgggatccgccagcgaacggtcccgaag
caagccaccgagcccgcactcgattccagcataaccacacttccggccgagagtgcggat
ctcgacgcccaaagccccgcagccgacctggtccgcgtgtacctgaacggcatcggcaag
accgcgctgctgaccgcggccgacgaggtcgagctggccaagcgcatcgaggcgggcgtc
ttcgccgcgcacatgctcgacaccgcggagaacctcacgccgaagcgccgttccgagctg
tccgcgctggtgcgcgacggccacgtcgcgaagaaccacctgctggaggccaacctccgc
ctggtggtgtcgctcgcgaagcgctacaccggccgggggatgccgctgctcgacctgatc
caggaggggaacctgggtctgatccgcgcggtggagaagttcgactactccaaggggttc
aagttctcgacctatgccacctggtggatccgccaggccatcaccagggggatggccgac
caggggcgcaccatccggctgccggtccacctggtggaacaggtgaacaagctcgccagg
atcaagcgcgacctgcaccagcagctcggccgcgaggccacgaacgaggagctggccgcc
gaatccggtatcgccgcggagaaggtctccgacctgctcgaccacgcgcgcgacccggta
agcctggacatgccggtgggcaccgaggaggacgcgccgctcggtgacttcatcgaggac
tccgaagccaccgatgcggagagcgcggtcatctcgggcctgctgcaggacgacctgcgc
cgcgtgctcgccaccctcgacgaccgcgagcagcacgtgatccggctgcgctacggcctc
gacgacgggcagccccgcacgctggaccagatcggcaagcacttcggcctgtcgcgcgag
cgcgtgcgccagatcgagcgcgaggtcatgtccaaactgcgccagggcgagcgggccgac
cggctccgcgcgtacgccagctga
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