Amycolatopsis sp. CA-230715: HUW46_01278
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Entry
HUW46_01278 CDS
T10444
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HUW46_01278
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyz02000
]
HUW46_01278
Transporters [BR:
amyz02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
HUW46_01278
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
ABC_ATPase
AAA_16
AAA_29
Zeta_toxin
MMR_HSR1
Rv0078B
AAA_22
RsgA_GTPase
DUF87
Motif
Other DBs
NCBI-ProteinID:
QWF77885
LinkDB
All DBs
Position
complement(1338464..1340200)
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AA seq
578 aa
AA seq
DB search
MWSAIRLFLSLRPRAWAGTAGLAGLMLLVTATYVGQGLLIAHLLSGVFSSIEADGLVLSL
AVIGVLQVVRVSLILVKDSWAPRVSARVKEAVREGLTLKLMEIGPGQAQRMRAGDLQSTL
VDSAELLDPLVGRFVPAVLASVLGSCLASVYVIAVDPVVGLVVLACALLAPLSKVAGRNW
IQERGDRWMVSYRGMYSESLDAVQGMATLKAFNASGRRRREMVERGEVFCRDSIRLMVAW
CGSSSVGALVVTIGTTASVGLGAWHAATGSVSVAGLFTILMLARETFRPMHELESAYHAA
YQAIPAGIAVADILRIEPHVRDSATAVPELRQNPPGLEFRAIRFCYPTRSAPALDGFSLT
VAPGERVAVVGRSGAGKSTVLGLLMRYFDVDSGSVRVDDRDIAEFPLAALRSLVGVVAQD
TYLFHGTVRENLLLAKPDATDDEIRRAVTAAQATEFISRLPQGFETVVGERGLKLSGGER
QRIAIARALLKDAPVLVLDEPTSSIDAANEAEITEALGELTRGRTTVIIAHRLSTVRDAD
RIVVMDAGRVVEFGSHPDLVARKGLYAELVATQSGVSA
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
gtgtggtcggcgatcaggctgtttctcagcttgcgtccgagggcttgggcgggaacagcg
ggtctcgccgggctgatgttgctggtgacggcgacgtatgtcggtcagggcctgctgatc
gcgcatttgctgtccggggtgttctcctcgatcgaggccgacgggctggtgctgtcgttg
gcggtgatcggtgttttgcaggtggtccgggtttcgctgatcctggtgaaggattcgtgg
gcgccccgcgtgtcggcgcgggtgaaggaggcggtccgggaagggctgacgctcaagctc
atggagatcgggccggggcaggcgcagcggatgcgtgccggtgatctgcagtcgacgctg
gtggactcggcggaactgctcgacccgctggtggggcggttcgtgcccgcggtgctggct
tccgtcctgggttcctgcctcgcttcggtgtacgtgatcgcggtcgatccggtggtgggc
ctcgtggtgctcgcgtgcgcgctactggcacctctgtccaaagtggccgggcggaactgg
atccaggaacgtggcgaccggtggatggtgtcctaccgcggtatgtattcggagagcctg
gacgccgtgcaggggatggcgacgctcaaggcgttcaacgccagtggcaggcggcgccgg
gagatggtcgagcgcggtgaggtgttctgccgggattccatccggctgatggtggcgtgg
tgcggttcctcgagcgtcggcgcgctcgtggtgacgatcggcacgacggcatcggtgggt
ttgggcgcctggcacgccgccaccggttcggtgagtgtggcgggattgttcacgatcctg
atgctggctcgcgagaccttccggcccatgcacgagttggaatcggcttaccacgcggcg
taccaggccattccagccggaatcgcggtcgccgacatcctgcgcatcgaaccgcacgtg
cgcgactcggcgaccgcggtgccggaattgcggcagaaccctcccggattggaattccgt
gctatccggttctgctacccgacccggagcgctccggcactcgacgggttcagcttgacg
gtggcgccgggcgagcgggtcgccgtcgtggggcggtccggtgcgggtaagagcaccgtg
ctgggcctgctgatgcggtacttcgacgtcgactcgggctccgtccgcgtcgacgatcgt
gacatagccgagttcccgctggccgctctgcggtcgctggtcggtgtcgtggcacaggac
acctacctgttccacggtacggtccgggaaaatctgctgttggccaagccggacgccacc
gacgacgagattcgccgtgcggtgaccgcggcgcaggcgaccgagttcatttcccggctg
ccgcagggattcgagacggtcgtcggcgagcgtggcctgaaactgtccggtggtgagcgc
cagcgcatcgcgatcgcccgcgccttgctcaaggacgcccccgtgctcgttctcgacgag
ccgacctcgagcatcgacgccgccaacgaagcggagatcaccgaagccctcggcgagctg
acccgcggccggacgaccgtgatcatcgcgcaccgactgtccacggtgcgcgacgccgac
cggatcgtggtgatggacgcgggccgggtggtcgagttcggcagccacccggatctggtg
gcacgtaagggtctttacgccgaactcgtcgcgacccagagcggagtgtccgcatga
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