Amycolatopsis sp. CA-230715: HUW46_01966
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Entry
HUW46_01966 CDS
T10444
Symbol
ermD
Name
(GenBank) rRNA adenine N-6-methyltransferase
KO
K00561
23S rRNA (adenine-N6)-dimethyltransferase [EC:
2.1.1.184
]
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amyz03009
]
HUW46_01966 (ermD)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
amyz01504
]
HUW46_01966 (ermD)
Enzymes [BR:
amyz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.184 23S rRNA (adenine2085-N6)-dimethyltransferase
HUW46_01966 (ermD)
Ribosome biogenesis [BR:
amyz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HUW46_01966 (ermD)
Antimicrobial resistance genes [BR:
amyz01504
]
Gene variants
Macrolide resistance genes
23S rRNA methyltransferases
HUW46_01966 (ermD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
Methyltransf_12
Methyltransf_ANTKMT
Methyltransf_31
TRM5-TYW2_MTfase
Methyltransf_23
Methyltransf_37
NodS
Motif
Other DBs
NCBI-ProteinID:
QWF78570
LinkDB
All DBs
Position
2238326..2239141
Genome browser
AA seq
271 aa
AA seq
DB search
MPSKGSRPNPSGVHFLADRRIVDGLIDSCPVGDGDLVLELGAGHGAITVPLTRTGAEVVA
VERDPEFARGLRARTADTARLRIVTADIRTFPLPAQRFSVIASIPYAISTTVLRRLLTPH
RTALDRAALVVEWGFAKRISAAVPRTAELAWWSARFTIRLRKRVPAACFSPAPRVDSAHL
VIERTAPGGKRFDRALWTLLDAAYRAQSAPLRQSAGRVLPYRNPNRVLRAAGLDPDARAD
TVRPSGWADLARRLAADDAIAWPPLPKALRE
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccctcgaaagggtctcgtcccaacccgtccggcgtgcacttcctcgccgaccgccgc
atcgtcgacgggctcatcgattcctgtcccgtcggcgacggcgatctcgtgctcgaactg
ggcgcgggacacggcgccatcacggtcccgttgaccaggacgggcgccgaggtggtcgcg
gtggaacgcgatcccgagttcgcccgcggcctgcgcgccaggaccgccgacaccgcccgg
ctccgcatagtcaccgcggacatccgcacgtttccccttcccgcgcaacgcttttcggtg
atcgcgagcatcccgtacgcgatctccacgaccgtgctgcggcgcctgctcaccccgcac
cgcaccgcgctcgaccgggccgcgctggtggtcgaatgggggttcgcgaaacggatcagc
gcggccgtcccgcgcaccgctgaactggcgtggtggtcggcgcggttcaccatccggctg
cggaaacgggtgcccgccgcgtgtttctccccggcacctcgcgtcgactccgcgcacctc
gtgatcgaacgcaccgcgcccggcggcaagcggttcgaccgtgcactgtggacactcctc
gacgcggcgtaccgggcacagtccgcaccgctgcgccagtcggcgggacgggtgctgccg
taccggaacccgaaccgcgtgttgcgggccgccgggctcgacccggacgcgcgcgcggac
accgtgcggcccagcgggtgggcggatctggcccgccgcctcgccgccgacgacgcgatc
gcgtggccaccgctcccgaaggcactgcgcgaatga
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