Amycolatopsis sp. CA-230715: HUW46_02289
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Entry
HUW46_02289 CDS
T10444
Symbol
dapF_2
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00300
Lysine biosynthesis
amyz00470
D-Amino acid metabolism
amyz01100
Metabolic pathways
amyz01110
Biosynthesis of secondary metabolites
amyz01120
Microbial metabolism in diverse environments
amyz01230
Biosynthesis of amino acids
Module
amyz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUW46_02289 (dapF_2)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUW46_02289 (dapF_2)
Enzymes [BR:
amyz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HUW46_02289 (dapF_2)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QWF78890
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Position
2545342..2546169
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AA seq
275 aa
AA seq
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MDFVKYQALGNDYLVIDPRETTFAPTPEAVRLVCDRHFGIGADGVLLGPIDPVSPFEGRE
PVRLRIFNSDGSECEKSGNGLRMFALYLTEHYHYPDRFVLRTVAGAAPVRVLDPAAGLVE
VGMGKARLTAVDEVFPFRGKEFRVTRVDVGNPHAVVPLAEISPELARELGPAIGRHPSLP
EGSNVQLVRVLDRDAVEIEIWERGAGYTLASGSSGCAAAAAVRALGMVGDTVEVRMPGGA
VEIRFDGDEITMTGTAKPVASGRFAPLFRATLDGR
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
gtggacttcgtcaagtaccaggcgctgggcaacgactacctggtgatcgatccgagggaa
accaccttcgcgccgacgccggaagccgtgcggctggtgtgcgaccggcacttcgggatc
ggtgccgacggcgtgctgctcggtccgatcgacccggtcagcccgttcgagggacgggaa
ccggtgcggctgcggatcttcaactccgacggcagcgaatgcgagaagagcggcaacggg
ctccggatgttcgcgctctacctgaccgagcactaccactacccggaccggttcgtgctg
cgcaccgtcgcgggcgcggccccggtcagggtgctcgacccggccgcgggcctcgtcgag
gtcgggatgggcaaggcgcggctgaccgccgtcgacgaggttttcccgttccgcggcaag
gaattccgggtgaccagggtggacgtcggcaacccgcacgcggtcgtgccgctcgcggag
atctcccccgagctggcgcgcgaactcggccccgcgatcggccggcacccgagcctgccg
gaaggatccaacgtgcagctcgtccgcgtgctcgaccgcgacgccgtcgaaatcgagatc
tgggaacggggcgcgggctacacgctcgcttccggcagcagcgggtgcgcggcggcggcc
gcggtgcgcgcgctgggcatggtcggcgacaccgtcgaggtccggatgccgggcggcgcc
gtcgaaatccgcttcgacggcgacgagatcaccatgaccgggacggcgaaaccggtggcc
tccggccggttcgccccgctgttccgcgccaccctcgacggccgctga
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