Amycolatopsis sp. CA-230715: HUW46_02575
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Entry
HUW46_02575 CDS
T10444
Symbol
cshA
Name
(GenBank) DEAD-box ATP-dependent RNA helicase CshA
Organism
amyz Amycolatopsis sp. CA-230715
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
adh_short
Phage_endo_I
Motif
Other DBs
NCBI-ProteinID:
QWF79168
UniProt:
A0A975RE92
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Position
2842842..2844575
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AA seq
577 aa
AA seq
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MTRQCALARERLIILSTTPESTESTEDAVALEHLESGLPETDPSHPLQAGAPVEPESPTF
AEFGVRPEIVRALEGAGIERTFAIQALTLPLALAGNDLIGQARTGMGKTLGFGVPLLQRV
TTPGDGTPQALVVVPTRELCLQVTHDLTDAGKHLGVRTLAIYGGRPYEPQIEALRKGVDL
VIGTPGRLLDLAEQRHLVLGKVSGLVLDEADEMLDLGFLPDIERILRMVPDSRQTMLFSA
TMPGPIITLARTFLNQPTHIRAEENDAGAVHERTTQFVYRAHSMDKPELIAKVLQAEGRG
LTMIFTRTKRTAQKVADELAERGFAAAAVHGDLGQGAREQALRAFRSGKVDVLVATDVAA
RGIDVDDVTHVINYQTPDDEKTYVHRIGRTGRAGKTGVAVTLVDWDEEPRWKLISDALGL
DKPEPVETYSTSKHLFTDLGIAEDATGRLPLAKRTRAGLSAEPEEKLGGRKRDRERTTTS
SRTRKPRRRTRGGADAAAAVEAADAAKTAEGQEGEGAARKPRRRTRGGAKPAAEANAHSG
PAAQEKETGEGGERPARRRRRRRSGSSNSSETPASAD
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaggcagtgcgcgctggcacgagagaggctgatcatcctgtccaccacccccgaa
tcgacggaatcgaccgaagacgccgtcgcactggaacacctcgaaagcggccttcccgag
accgacccgtcccacccgctccaggcaggcgccccggtcgaaccggaatcgcccaccttc
gccgagttcggcgtccgtcccgagatcgtccgcgcgctcgaaggcgccggtatcgagcgg
accttcgcgatccaggcgctgaccctgccgctggccctggccggcaacgacctcatcggc
caggcccgcaccggcatgggcaagacgctcggtttcggcgtgccgctgcttcagcgcgtc
accacccccggcgacggcaccccgcaggcgctcgtcgtggtgccgacgcgcgagctgtgc
ctgcaggtcacccacgacctcaccgacgcgggcaagcacctcggcgtgcgcacgctcgcg
atctacggcggccgcccgtacgagccgcagatcgaggccctgcgcaagggcgtcgacctg
gtgatcggcacgcccggccgtctcctcgacctcgccgagcagcgccacctggtcctgggc
aaggtctccgggctcgtcctcgacgaggccgacgagatgctcgacctcggcttcctcccc
gacatcgagcgcatcctgcggatggtgccggactcccggcagaccatgctgttctcggcc
accatgccgggcccgatcatcaccctcgccaggacgttcctgaaccagccgacgcacatc
agggccgaggagaacgacgcgggcgcggtccacgagcgcaccacgcagttcgtctaccgc
gcgcactcgatggacaagccggagctgatcgcgaaggtcctgcaggccgagggccgcggg
ctgacgatgatcttcacgcgcaccaagcgcaccgcgcagaaggtggccgacgaactggcc
gagcgcgggttcgccgcggccgcggtgcacggcgacctcgggcagggcgcgcgcgagcag
gcgctgcgggcgttccggtccggcaaggtcgacgtgctggtcgccaccgacgtcgcggcg
cgcgggatcgacgtcgacgacgtcacccacgtgatcaactaccagacgccggacgacgag
aagacctacgtgcaccgcatcggccgcaccggccgcgcgggcaagaccggggtcgcggtc
acgctcgtcgactgggacgaggaaccgcgctggaagctgatctccgacgcgctcggcctc
gacaagccggaacccgtcgaaacctactcgacctcgaagcacctgttcaccgacctcggc
atcgccgaggacgccaccggcaggctgccgctggccaagcgcacgcgcgccgggctgtcg
gcggagccggaggagaagctcggcggccgcaagcgcgaccgcgagcgcaccaccaccagc
agcaggacccgcaagccccgccgccggaccaggggcggtgccgacgccgcggccgcggtc
gaagccgccgacgcggcgaagacggccgagggccaggagggcgaaggcgccgcgaggaag
cctcgccgccgcacccgtggtggcgccaagcccgccgcggaagcgaacgcgcactcgggt
cccgccgcgcaggagaaggaaaccggtgaaggcggcgagcgcccggcacgtcgccgtcgc
cgccgtcgttccggcagctccaacagcagcgaaacacccgcttcggcagactga
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