Amycolatopsis sp. CA-230715: HUW46_03045
Help
Entry
HUW46_03045 CDS
T10444
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyz03016
]
HUW46_03045 (truA)
Enzymes [BR:
amyz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HUW46_03045 (truA)
Transfer RNA biogenesis [BR:
amyz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HUW46_03045 (truA)
Prokaryotic type
HUW46_03045 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QWF79636
LinkDB
All DBs
Position
complement(3319596..3320432)
Genome browser
AA seq
278 aa
AA seq
DB search
MRLDVSYDGTDFSGWARQPGRRTVQGVVEDALAKQPPGAAVPKSVVVAGRTDAGVHATAQ
VLHVDVAPLAGKTSSMLAVDDQGIPDLTRMRHRWNRILPADVRVLGARVAPSGFDARFSA
TRRHYRYQVSDAPWGVDPLRRNDTLAWGLPLSVDVLNQASEDLLGLHDFAAFCKQREGGT
TIRELQRLEWQRVDDHLIRAAVSADAFCHSMVRSLVGALLLAGDGRRGAAWPVEVLEKGV
RESAVAPAHGLTLVGVDYPPDAELAARADQTRNVRSSF
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcctggacgtcagctacgacggcacggacttctcgggctgggcgcgccaaccgggc
cgccggaccgtgcagggcgtcgtggaagacgcgctggcgaagcagcctcccggcgccgcc
gtcccgaaatccgtcgtcgtcgccggccgcaccgatgccggcgtccacgccaccgcccaa
gtcctccacgtcgacgtcgcgcctttagcgggcaaaacgtcctcgatgttggcggtggat
gaccagggcatccctgacctcaccaggatgcggcaccgctggaaccgcattctgcccgca
gatgttcgcgttttgggcgcgcgcgtcgccccgagcggtttcgacgcgcgtttttccgca
acacggcggcattatcggtaccaggtgtccgatgcgccgtggggagtcgatccgttgcgg
cgcaacgacaccctggcctggggccttccgctgtccgtcgacgtgttgaaccaggcctcc
gaggacctactcggcctgcacgacttcgccgctttctgcaagcagcgcgagggaggcacg
accatccgtgaattgcagcgtctggaatggcagcgagtcgacgaccacctgatccgcgcc
gcggtttcggcggacgcgttctgccattcgatggtccggagtctggtcggtgcgttgctg
ctcgcgggggacggcaggcgaggcgccgcatggccggtggaagtactggaaaagggcgtg
cgagaaagcgccgtggccccagctcacggtctcaccctggtgggtgtggattatcccccc
gatgccgaactggccgcgcgtgccgatcagacccggaacgtccgcagctccttttag
DBGET
integrated database retrieval system
