Amycolatopsis sp. CA-230715: HUW46_03509
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Entry
HUW46_03509 CDS
T10444
Symbol
sigF_1
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amyz03021
]
HUW46_03509 (sigF_1)
Transcription machinery [BR:
amyz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HUW46_03509 (sigF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
MarR_2
HTH_3
HTH_31
KORA
MarR
HTH_24
HTH_Tnp_4
Sigma70_ECF
PF0610-like_N
HTH_37
HTH_ParB
UBA_2
Motif
Other DBs
NCBI-ProteinID:
QWF80091
LinkDB
All DBs
Position
3776691..3777491
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AA seq
266 aa
AA seq
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MSEAGTRYPTSSHEYEHLRPLFAELASLAEEDPRRAEVRDKLVTGHLPLAEHIAQRFSGR
GVAKEDLVQVGTVGLINAVDRFDASRGADFLSFAVPTVMGEVRRHFRDTGWLVRVPRRLK
ELHLSLSNASTKLSQQLGRAPTPSELAEHLGVTKDDVYEGLEAGNAYNSASLDEVLTSDS
DSAALGDLLGEDDAGLIGVENSGALEPLVAALPERERRILALRFVHNLTQTQIAERIGVS
QMHVSRLLARSLTALREGLSEEDLPN
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaagccggaacgcggtatcccacgtcgtcgcacgagtacgaacacctgcgaccg
ctgttcgccgaactcgcgtcgctggcagaagaagacccgcgccgcgcggaggtccgcgac
aagctggtcaccgggcacctgccgctcgcggagcacatcgcgcagcggttctccggccgc
ggggtcgcgaaggaggacctggtccaggtcggcacggtcggcctgatcaacgccgtcgac
cggttcgacgcctcccgtggcgcggacttcctgtccttcgcggtaccgaccgtgatgggc
gaggtgcgcaggcacttccgcgacaccgggtggctggtgcgcgtcccccgcaggctcaag
gaactgcacctttccctgtcgaacgcgagcacgaagctgtcccagcagctcggcagggcg
ccgacgccgagcgaactcgccgagcatctcggggtcacgaaggacgacgtctacgaaggg
ctcgaagcgggcaacgcctacaactcggcctcgttggacgaggtgctcacgtccgattcg
gacagtgccgcgctcggcgacctgctcggcgaggacgacgccgggctgatcggggtggag
aacagcggcgcgctggagccgctggtcgcggcactgcccgaacgcgaacggcggatactc
gcgctgcggttcgtgcacaacctcacgcagacccagatcgccgaacggatcggggtctcg
cagatgcacgtgtcgcggttgctcgccaggagcctcaccgcgctccgcgaaggtctgtcc
gaagaggacttgccgaactag
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