Amycolatopsis sp. CA-230715: HUW46_03516
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Entry
HUW46_03516 CDS
T10444
Symbol
mku
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HUW46_03516 (mku)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyz03400
]
HUW46_03516 (mku)
DNA repair and recombination proteins [BR:
amyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HUW46_03516 (mku)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Rho_N
TGT_C2
Motif
Other DBs
NCBI-ProteinID:
QWF80098
LinkDB
All DBs
Position
3782487..3783404
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AA seq
305 aa
AA seq
DB search
MARPIWSGSINFGLVTVPVALYSATEDHSIHFRQFERGTSDRIRYRRVNERTGKEVDYDK
IVKGYELDDGEYVLVEPEELDEIAPGRSRTIDIESFVDLEEVDPIYFQRTYWLGPAKEEF
HRAYALLLQAMAKTNRAGIARFVMRGKEYLAAVRAGDGVLTLNTMHFAADIRDPAKELKS
LPELKARGKELDMAVSLVDSMTEQWQPDQYVDTYTERVKKLIDDKKAGRTVTPESEPSEP
TKVVDLFEALSRSVEGRRKGGKRGKKKPDVSDLSKADLEKLAREQDVKGRSKMTRAELEK
AVKAS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccgatctggagcgggtcgatcaacttcggcctcgtcaccgtgccggtggcg
ttgtacagcgcgaccgaggaccactcgatccacttccgccagttcgagcgcggcacctcc
gaccgcatccggtaccgcagggtcaacgagcgcaccggcaaggaggtcgactacgacaag
atcgtcaagggctacgagctggacgacggcgagtacgtgctcgtcgaacccgaggagctg
gacgagatcgcgccgggccggtcgcgcacgatcgacatcgagtcctttgtggacctcgaa
gaggtggacccgatctacttccagcgcacctactggctcggcccggcgaaggaggagttc
caccgcgcgtacgcgctgctgctgcaggcgatggcgaagacgaaccgggcggggatcgcg
cgcttcgtcatgcgcggcaaggaatacctggcggcggtgcgcgcgggcgacggcgtgctg
acgttgaacaccatgcacttcgccgcggacatccgggatccggcgaaggagctgaagagc
ctgccggagctgaaggcgcgcggcaaggaactggacatggcggtcagcctcgtcgactcg
atgaccgagcagtggcagccggaccagtacgtggacacctacaccgagcgcgtgaagaag
ctcatcgacgacaagaaggcgggccgcacggtcaccccggagtccgagccgtcggagccg
acgaaggtggtcgacctgttcgaggcgctttcccgcagcgtcgaaggccgccgcaagggc
ggcaaacgcgggaagaagaagcccgacgtgtccgacctgagcaaggccgacctggaaaag
ctcgcgcgcgaacaggacgtcaagggccgctccaagatgacgcgcgccgaactggagaag
gcggtcaaggcctcctga
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