Amycolatopsis sp. CA-230715: HUW46_03790
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Entry
HUW46_03790 CDS
T10444
Symbol
sgrR_1
Name
(GenBank) HTH-type transcriptional regulator SgrR
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HUW46_03790 (sgrR_1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amyz02000
]
HUW46_03790 (sgrR_1)
Transporters [BR:
amyz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HUW46_03790 (sgrR_1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QWF80370
UniProt:
A0A975MYG4
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All DBs
Position
complement(4044470..4045960)
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AA seq
496 aa
AA seq
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MKVRFGAAALALLVVLPGCSAGSSAVVSNDPSTLTVGFAAEPQNFDFTRTDGSAIPQALL
YNVYEGLVKLDPEGRIVPLLAESWTVSPDRTVYDFRLRPGVKFGNGAPFTAEDVRFSLLR
VKTDWTISLKSAMNVVRQVDVVDPLHARVVLEKPSNGWLFSLTSRIGAMFSPTGVADLAN
TPVGTGPYQVASRRRGDSVVLRANPAYWGRKPAYTTVNLKYIKDPTALNNALLSNGIDVI
ATITAPDSIPQFESDNRFSVLQGTTNSEVVMAFNDARPPFDDVRVRQAVTLAVDRKALMD
TAWAGRGTLIGSMVPPTDPWYEDLSAAYPFDPAKAKALLAQAGKTNLSLRMRIPNLPYAI
SSAQVVASQLADIGVQVSIEPLDFPAVWLKQVFTDHDFDLSIVQHVEARDITTFGKPAYY
WGYDNPGVRKLLATADAGTPEEQVANMKQVAKQLSADAAADWLFLFPNVTVAKKKVTGLA
RNQVSESFDLTGLGSS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtccggttcggcgctgccgcgctcgccctgctcgtcgtgcttcccgggtgttcc
gccggatcgagcgcggtcgtttcgaacgacccgtcgacgctgaccgtcgggttcgccgcc
gagccgcagaacttcgacttcacccgcaccgacggctccgccatcccgcaggccttgctc
tacaacgtctacgagggcttggtgaaactcgatccggagggccggatcgtgccgctactc
gcggaatcgtggacggtcagccccgatcgcacggtctacgacttccgcttgcggccgggc
gtgaagttcggcaacggcgcgccgttcaccgcggaggacgtccggttttccttgctgcgc
gtcaaaaccgactggacgatctcgctgaagtccgcgatgaacgtggtgcgccaggtcgac
gtggtggacccgctgcacgcccgcgtggtgctggaaaaaccgagcaacggctggctgttc
agcctcaccagccggatcggcgcgatgttctcgccgaccggcgtcgccgatctcgcgaac
accccggtcggcaccggcccgtaccaggtggcgagcaggcgccgcggcgattccgtggtg
ctgcgcgcgaatccggcgtactggggccgcaaacccgcctacaccacggtgaacctcaag
tacatcaaggatccgacagcgctcaacaacgcgttgctcagcaacggcatcgacgtcatc
gccacgatcaccgcgcccgattcgatcccgcagttcgagagcgacaaccggttctccgtc
ctgcagggcaccacgaacagcgaagtcgtgatggccttcaacgacgcgcgcccgccgttc
gacgacgtccgcgtccgccaggcggtgacgctcgcggtggaccgcaaagcgctgatggac
accgcgtgggccgggcgcggcacgctcatcggcagcatggtgccgccgacggatccctgg
tacgaggacctttccgcggcgtacccgttcgacccggcgaaggcgaaagcgctgctcgcg
caggcgggcaagaccaacctctcgctgcggatgcggatcccgaacctgccgtacgcgatc
tcgtcggcgcaggtcgtcgcatcgcagctcgccgacatcggcgtgcaggtgtcgatcgaa
ccgctcgacttccccgcggtgtggctcaagcaggtcttcaccgaccacgacttcgacctg
tcgatcgtgcagcacgtcgaagcgcgcgacatcaccacgttcggcaaaccggcctactac
tggggatacgacaaccccggcgtgcggaagctcctggcaaccgcggacgcgggcacgccg
gaggagcaggtcgcgaacatgaagcaggtggcgaagcagctctccgccgacgccgccgcc
gactggcttttcctgttcccgaacgtcaccgtggcgaagaagaaggtcaccggcctcgcc
cgcaaccaggtcagcgaatcgttcgacctgaccgggctcgggtcgtcatga
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