Amycolatopsis sp. CA-230715: HUW46_04023
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Entry
HUW46_04023 CDS
T10444
Name
(GenBank) hypothetical protein
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyz03000
]
HUW46_04023
Transcription factors [BR:
amyz03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
HUW46_04023
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
TetR_C_11
TetR_C_14
TetR_C_6
TetR_C_45
TetR_C_33
Motif
Other DBs
NCBI-ProteinID:
QWF80600
LinkDB
All DBs
Position
4281427..4281972
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AA seq
181 aa
AA seq
DB search
MQAAFWDNGYAGTSLEDLLAASELGKGSLYGAFGDKKSLFLRVLRLYDEANDRMLRSWLE
QAERGIEVIRDFVTGPVRDPSGEQARRGCLLANTAMELSVSTAEVAAEARRSYASTAAVL
ADAVRRAQREGDVAARLDPDVTARAVLAGQLGLIVLGRVGQDPAALLVTAEALLDGLLPA
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggcggcgttttgggacaacgggtacgcgggcacatcgctcgaagatctccttgcg
gccagcgaactcggcaaagggagcctgtacggagcgttcggggacaagaagagcttgttt
ctgcgcgtgctgcgcctgtatgacgaggccaatgatcgaatgctgcgcagctggctcgag
caagctgagcgcggcatcgaggtgatccgggatttcgtgaccgggccggtgcgtgatccc
agtggcgagcaggcccgccggggttgcctgctcgccaacaccgcgatggaactgtcggtg
agtaccgccgaggtggccgcggaggcgcggcgcagctacgcctcgaccgccgccgtgctg
gccgacgcggtacgacgagcgcagcgcgagggcgacgtcgcggcccgcctcgacccggac
gtcaccgcccgcgcggtgctggccggtcagctcgggctgatcgtgctcggtcgagtcggt
caggatccggccgcgttgctggtcacggccgaggcgctgctcgacggcctgctgcccgcg
ttctga
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