Amycolatopsis sp. CA-230715: HUW46_04357
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Entry
HUW46_04357 CDS
T10444
Symbol
ku_1
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HUW46_04357 (ku_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyz03400
]
HUW46_04357 (ku_1)
DNA repair and recombination proteins [BR:
amyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HUW46_04357 (ku_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QWF80932
LinkDB
All DBs
Position
4604651..4605493
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AA seq
280 aa
AA seq
DB search
MRSMWKGSVSFGLVTIPVNLYTATENKSVSLRQVHEADGARIQYKRYCSAENKEVPYAEI
AKGYELPDGGMVVLTDTDFAELPLPTSRAIDVLEFVPLEAIDPIYYDSTYYIEPQKAAAK
PYVLLRDALHKSGQVAIAKVALRQRESLAILRVHSDLLVMTTMLWPDEVRTPDFGFLDED
APQIRPQELTMAGSLIDSMSEPVFEPDKYQDSYREALEALIEAKVSGNETAAPPEAPGKA
EVVDLMSALQASVSAAKETRKPAKGKAKSGEEKKRRTKSA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatgtggaagggctcggtgtccttcgggttggtcaccatcccggtcaacctg
tacacggcgaccgagaacaagagcgtcagcctgcggcaggtccacgaggccgacggcgcg
cgcatccagtacaagcggtactgctcggcggagaacaaggaagtgccctacgcggagatc
gcgaagggctacgagctgcccgacggcggcatggtcgtgctcaccgacaccgatttcgcg
gagctgccgctgcccacctcccgcgcgatcgacgtgctcgaattcgtcccgctcgaggcc
atcgatccgatctactacgacagcacctactacatcgagccgcagaaagcggccgcgaag
ccgtacgtgctgctccgcgacgccctgcacaaatcgggccaggtcgcgatcgcgaaggtc
gcgctccgccagcgcgaatcgctcgcgatcctgcgcgtccactccgacctgctggtgatg
accaccatgttgtggccggacgaggtccgcacccccgatttcggcttcctcgacgaggac
gccccgcagatccgcccgcaggagctgaccatggcgggctccctgatcgactccatgtcg
gagccggtcttcgagccggacaagtaccaggacagctaccgcgaggcactcgaagcgctg
atcgaggcgaaggtcagcggcaacgagaccgcggcgccgccggaggcaccgggcaaggcc
gaggtcgtcgacctgatgagcgcgctgcaggccagcgtcagcgcggcaaaggagacccgc
aaaccggccaagggcaaggccaagagcggcgaggaaaagaagcgccgcaccaagagcgcc
tga
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