Amycolatopsis sp. CA-230715: HUW46_04613
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Entry
HUW46_04613 CDS
T10444
Symbol
vsr
Name
(GenBank) Very short patch repair protein
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyz03400
]
HUW46_04613 (vsr)
DNA repair and recombination proteins [BR:
amyz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HUW46_04613 (vsr)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vsr
DUF559
MTES_1575
TY-Chap3
Motif
Other DBs
NCBI-ProteinID:
QWF81187
LinkDB
All DBs
Position
4851096..4851473
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AA seq
125 aa
AA seq
DB search
MRANTSRDTGPERAVRRLVHAAGLRYRVDARPEPSLRRRADLVFTRARVAVFVDGCFWHG
CPAHYSPPGTNSGYWAAKIAANAERDAETTALLRDAGWTVLRGWEHEPARDLAARVVEAV
RGARR
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atgcgggccaacacctcgcgtgacacgggcccggagcgggcggtgcgacggctcgtgcac
gcggctggcctgcggtaccgggtggacgcgcggccggagccgtcgctgcggcggcgggcg
gatctcgtgttcacccgcgcccgcgtcgccgtgttcgtcgacggctgcttctggcacggc
tgcccggcgcactattcgccgccgggcacgaacagcggctactgggcggcgaagatcgcc
gccaacgcggaacgggacgccgaaaccacggcgttgctgcgggacgcgggctggacggtc
ctgcgcgggtgggagcacgaacccgcgcgggacctggccgccagggtggtcgaagcggtc
cgcggagcgcggcgatga
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