Amycolatopsis sp. CA-230715: HUW46_04845
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Entry
HUW46_04845 CDS
T10444
Symbol
topA_1
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amyz03032
]
HUW46_04845 (topA_1)
03400 DNA repair and recombination proteins [BR:
amyz03400
]
HUW46_04845 (topA_1)
Enzymes [BR:
amyz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUW46_04845 (topA_1)
DNA replication proteins [BR:
amyz03032
]
Prokaryotic type
DNA Topoisomerases
HUW46_04845 (topA_1)
DNA repair and recombination proteins [BR:
amyz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUW46_04845 (topA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
GemA
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QWF81414
UniProt:
A0A975RFE9
LinkDB
All DBs
Position
5077343..5080168
Genome browser
AA seq
941 aa
AA seq
DB search
MSGERDSVAGSARTNKSGTGANGAGRRRLVIVESPTKAKKIAPYLGRNYVVESSRGHIRD
LPRGAADVPAKYKGQSWARLGVDVDNDFEPLYIVTPDKKSTVTELKSLLKDVDELYLATD
PDREGEAIAWHLLEALKPKVPVRRMVFHEITEQAIQTAAESTRELDGDLVDAQETRRILD
RLYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMKFTSASYWDIGATMDAGADA
TPRNFPARLVAVDGARLATGRDFGADGQLKAASSKAEVRILDEAEANRLAQALRARDFSV
TSVEEKPYTRRPYAPFMTSTLQQEAGRKMRFTSDRTMRIAQRLYENGYITYMRTDSTTLS
ETAISAARSQATQLYGKDYVADKPRQYTRKVKNAQEAHEAIRPAGEVFRTPGQVAKDLDT
DEFRLYELIWQRTIASQMADAKGTTMSVRITGTATSGEECTFSASGRTITFAGFLKAYVE
SVDSEAGGEADDKQSRLPNLVKDQALTAAELTPDGHTTSPPPRYSEPSLISKLEELGIGR
PSTYTSIIKTIQDRGYVWKKGSALVPSWIAFSVVGLMERHFERLVDYDFTAGMEDELDRI
AAGDEHRTQWLSKFYFGGDMGVDGSIGRLGGLKKLVDGSVEGIDAREINSIPMFTDSDGH
DVVVRVGRYGPYLEREVDGASQRANLPEDLPPDELTAEIAEKLFATPQEGRVLGTDPVSG
HEIVAKEGRFGPYVTEVLPEPEELPETATAAEKKAAKAKRPKPRTGSLFKSMAIESMTLD
DALKLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLETEQQIFDITLEEALKIY
SEPKRRGRQAAAKPPLKELGDDPVSGKPMVVKDGRFGPYVTDGEYNATLRKADSIEDLTA
DRAAELLAEKRAKGPAPKRKAPAKKATTAKKTPAKKAPAKK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgagcggagagcgggacagcgtggctggatcggcacggaccaacaagagcggtaccggt
gcgaacggcgccgggcgacgtcggctggtcatcgtcgagtcgccgaccaaggccaagaag
atcgcgccctacctcggccgcaactacgtcgtggagagctctcgcggccacatccgcgac
ctgccccgcggcgccgccgacgtgccggccaagtacaagggccagtcgtgggcccgcctc
ggcgtcgacgtggacaacgacttcgagccgctctacatcgtcaccccggacaagaagtcc
acggtcaccgagctgaagtcgctgctcaaggacgtcgacgagctctacctcgcgacggac
cccgaccgcgagggcgaggcgatcgcctggcacctgctcgaggcgctcaagccgaaggtg
ccggtccggcggatggtgttccacgagatcaccgagcaggccatccagacggccgcggag
agcacccgcgagctcgacggcgacctggtcgacgcgcaggaaacgcgccgcatcctcgac
cggctctacggctacgaggtcagccccgtgctgtggaagaaggtcatgccgaagctctcg
gcaggccgcgtgcagtcggtcgcgaccaggatcgtggtcgagcgcgagcgcgagcggatg
aagttcacctccgcctcgtactgggacatcggcgccacgatggacgcgggcgccgacgcc
acgccgcggaacttcccggcacggctggtcgccgtggacggcgcgcggctggccaccggc
cgcgacttcggcgcggacggccagctcaaggcggcgtcgagcaaggccgaggtccggatc
ctggacgaggccgaggcgaaccggctggcccaggcgctgcgggcgcgcgatttcagcgtc
accagcgtcgaggagaagccgtacacccggcggccgtacgccccgttcatgacctcgacg
ctgcagcaggaggcgggccgcaagatgcggttcacctccgaccggacgatgcggatcgcc
cagcggctgtacgaaaacggctacatcacctatatgcgtaccgactcgacgacgctgtcg
gagacggcgatctcggcggcgcgcagccaggccacgcagctttacggcaaggactacgtc
gccgacaagcctcgccagtacacccgcaaggtgaagaacgcgcaggaagcccacgaggcg
atccgtcccgccggtgaggtgttccgcacgccgggccaggtcgcgaaggacctcgacacc
gacgagttccggctctacgagctgatctggcagcgcacgatcgcctcgcagatggccgac
gccaagggcaccacgatgtcggtgcgcatcaccggcacagccacgagtggcgaagagtgc
acgttctccgcgtccggccgcacgatcaccttcgccgggttcctgaaggcctacgtcgag
tccgtcgacagcgaggcgggcggcgaggccgacgacaagcagagcaggctgccgaacctg
gtcaaggaccaggcgctgaccgcggcggagctgaccccggacgggcacaccacctcgccg
ccgccgcgctacagcgagccgagcctgatcagcaagctcgaagagctgggcatcggccgc
ccgtcgacctacacctcgatcatcaagaccatccaggaccgcggctacgtgtggaagaag
ggctccgcgctcgtcccgtcctggatcgcgttctccgtggtcgggctgatggagcggcat
ttcgagcggctcgtcgactacgacttcaccgcgggcatggaggacgagctcgaccgcatc
gcggcgggcgacgagcaccgcacgcagtggctgtcgaagttctacttcggtggcgacatg
ggcgtcgacgggtccatcgggcggctcggcgggctgaagaagctcgtcgacggcagcgtc
gaggggatcgacgcgcgcgagatcaactcgatcccgatgttcaccgactccgacggccac
gacgtcgtggtcagggtcgggcggtacgggccgtacctcgagcgcgaggtggacggcgcg
tcgcagcgcgcgaacctgcccgaggacctgccgccggacgagctgaccgcggagatcgcg
gagaagctgttcgcgacgccgcaggaaggcagggtgctcggcaccgacccggtgagcggg
cacgagatcgtcgcgaaggaagggcgcttcgggccgtacgtcaccgaggtgctgcccgag
ccggaggaactgcccgagacggccaccgcggcggagaagaaggcggcgaaggcgaagcgc
ccgaagccgcgcacgggctcgctgttcaagtcgatggcgatcgagtcgatgacgctggac
gacgcgctgaagctgctttcgctgccgcgcgtggtgggcaaggacccggagtccggtgac
gagatcaccgcgcagaacgggcggtacgggccgtacctgaagaagggcacggattcgcgg
tcactggagaccgagcagcagatcttcgacatcacgctcgaagaggcgctgaagatctac
tccgagccgaagcgccgcgggcgccaggccgccgcgaagccgccgctgaaggagctcggc
gacgacccggtgtccgggaagccgatggtggtcaaggacggccggttcggtccgtacgtg
accgatggcgagtacaacgcgaccctgcgcaaggccgacagcatcgaggacctgaccgcg
gaccgcgcggccgagctgctggcggaaaagcgtgcgaagggcccggcgccgaagcggaag
gcaccggccaagaaggcgaccacggcgaagaagacaccggcgaagaaggctccggccaag
aagtag
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