Amycolatopsis sp. CA-230715: HUW46_06562
Help
Entry
HUW46_06562 CDS
T10444
Symbol
csd_1
Name
(GenBank) putative cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00450
Selenocompound metabolism
amyz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
HUW46_06562 (csd_1)
Enzymes [BR:
amyz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
HUW46_06562 (csd_1)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
HUW46_06562 (csd_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
QWF83122
LinkDB
All DBs
Position
complement(6943413..6944597)
Genome browser
AA seq
394 aa
AA seq
DB search
MDSAEIQRVRQDTPGCQEIRHFNNAGASLPPRQVTETVIEHLRAEERRGGYEATAAASER
VEAVYGSLARMLNAAPEDIALTDSATRSWQAIFYAIEFGAGDRILTCRSEYASNAIAYLQ
VAERTGAIVEVVDDDEHGQLDVEDLKRRIDGSVKLISISHVPTQGGLVNPAEAVGEVASS
AGIPYLLDACQSAGQLDLDVERLRCDALTAAGRKYLRGPRGTGFLYARPSLRARLEPAML
DLHSAVWTAPDRYEVVESARRFEAWERSTATVLGLGAAVDYALGLGLRRIETRVAALGEA
LRTRLREIDAVTVHDLGERRCGIVTFSVDGLPSPELNKLLAAERVNTSVTYRESAQYDFT
GRNLPVLARASVHYYNTEAEIDTLAELVSRFARG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgccgagatccagcgcgtgcgccaggacacccccggatgccaggagatccgc
cacttcaacaacgccggtgcttcgctgccgccgaggcaggtcaccgaaaccgtgatcgag
cacctgcgcgccgaggaacgccgtggtggctacgaagccaccgccgccgcgagcgagcgg
gtcgaagccgtctacggttcgctcgccagaatgctcaacgccgcgccggaggacatcgcg
ctgaccgacagcgccacgaggtcgtggcaggcgatcttctacgccatcgagttcggcgcc
ggggaccgcattctcacctgccgctccgagtacgccagcaacgcgatcgcctacctgcag
gtcgccgagcggaccggcgcgatcgtcgaggtcgtcgacgacgacgagcacggccagctc
gacgtggaagacctcaagcgccgcatcgatggcagcgtcaagctgatctcgatctcgcac
gtgccgacgcagggcgggctggtgaaccccgccgaagcggtcggcgaggtggcctcctcg
gccgggatcccgtacctgctggacgcctgccagtcggctggccagctcgatctcgacgtc
gagcggctgcgctgcgacgcgctgaccgcggcgggccggaagtacctgcggggcccgcgc
ggcaccgggttcctgtacgcgcggccgtcgctgcgggcacggctggagcccgcgatgctc
gacctgcactcggcggtctggaccgcgccggaccgctacgaagtggtggaatcggctcgg
cggttcgaggcgtgggaacggtccacggcaacggttctcgggctcggcgccgccgtcgac
tacgcgctcgggctcggcttgcgccgcatcgagacgcgagtcgccgcgctcggcgaagcg
ctgcggacgcggctgcgcgagatcgacgcggtcaccgtgcacgacctcggcgagcggcgc
tgcggcatcgtcacgttcagcgtcgacggcctgccctcgcccgagctgaacaagctgctc
gcggccgaacgcgtcaacacctcggtgacctaccgcgaatccgcgcagtacgacttcacc
gggcggaacctgccggtgctggcccgcgcctcggtgcactactacaacaccgaggcggag
atcgacacgctcgccgaactcgtctcccggttcgccagggggtga
DBGET
integrated database retrieval system
