Amycolatopsis sp. CA-230715: HUW46_06816
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Entry
HUW46_06816 CDS
T10444
Symbol
degA_1
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyz03000
]
HUW46_06816 (degA_1)
Transcription factors [BR:
amyz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HUW46_06816 (degA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_IclR
DUF348
Motif
Other DBs
NCBI-ProteinID:
QWF83376
UniProt:
A0A975N503
LinkDB
All DBs
Position
complement(7198508..7199536)
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AA seq
342 aa
AA seq
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MNGQPHVTLEDVARSAGVSLATASRVLNGTTNVRPDLRDRVVSAAADLAYTPNAHAQALA
GASHRTVGVICHDVSDPYFASIARGVMRVAGENGLLVMLASTFRDPGKEIAYVSMFRAQR
ASAILLIGSGFEDRAWEQAMAAELDPYRKGGGQVAVVSRHRSLKVDTVQPENREGAAELA
KALLAMGHRSFAVLSGPRALTTVVDRLGGFREALAEAGIELAEEDIFEAAFTRDGGYAAA
NAMLASGRKPTCVFAVTDVMAIGALTALREAGVSVPGDVSLAGFDDIPVVRDLTPPLTTV
ALPLEELGAQAMELAANGTKSRSRVKRLGGEVVLRASTARPR
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacggccagccgcacgtgacgctcgaagacgtcgccaggagcgcgggtgtttcgctg
gcgaccgcgtcgcgcgtgctcaacgggaccacgaacgtgcgccccgacctgcgcgacagg
gtggtttccgcggccgcggacctcgcctacacgccgaacgcgcacgcgcaggcgctcgcg
ggcgcctcgcaccgcacggtcggcgtgatctgccacgacgtgagcgacccgtacttcgcc
tcgatcgcgcgcggcgtgatgcgggtggccggggagaacgggttgctggtgatgctggcg
agcacctttcgcgatcccggcaaggaaatcgcctacgtgtcgatgttccgcgcccagcgc
gcgtcggcgatcctgctgatcgggtccggtttcgaggaccgcgcctgggaacaggcgatg
gccgccgagctggatccgtaccgcaagggcggcgggcaggtcgcggtggtgagcaggcac
cgcagcctcaaggtcgacacggtgcagccggagaaccgcgagggcgccgccgaactggcg
aaggcgctgctggccatgggacaccggagcttcgcggtgctcagcggcccgcgcgcgctg
accaccgtcgtcgaccggctcggcggtttccgcgaggcgctcgccgaagcggggatcgaa
ctggccgaagaggacatcttcgaagcggcgttcacccgcgacggtggctacgcggcggcg
aacgcgatgctggcctccgggcggaaaccgacctgcgtgttcgcggtgacggacgtgatg
gcgatcggcgcgctcaccgcgctgcgcgaagcgggcgtgtcggtacccggggacgtctcg
ctcgccgggttcgacgacatcccggtggtgcgggacctcacgccaccgctgaccaccgtc
gcactgccgttggaggaactgggcgcgcaggcgatggagctggccgcgaacggcacgaag
agccggagcagggtcaagcggctgggcggcgaggtcgtgctgcgcgcgagcaccgcccgc
ccgcgctga
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