Amycolatopsis sp. CA-230715: HUW46_07419
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Entry
HUW46_07419 CDS
T10444
Symbol
dapF_3
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amyz Amycolatopsis sp. CA-230715
Pathway
amyz00300
Lysine biosynthesis
amyz00470
D-Amino acid metabolism
amyz01100
Metabolic pathways
amyz01110
Biosynthesis of secondary metabolites
amyz01120
Microbial metabolism in diverse environments
amyz01230
Biosynthesis of amino acids
Module
amyz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUW46_07419 (dapF_3)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HUW46_07419 (dapF_3)
Enzymes [BR:
amyz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
HUW46_07419 (dapF_3)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QWF83976
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Position
complement(7879047..7879913)
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AA seq
288 aa
AA seq
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MTTTLKLDNDTLDADYHALRQRTACGIELDRVRFALMHGNGNTILVVDTVRSGLSENDIN
GELARALCRSFTAIRVDGIAFLSTASRPVRMTYFEGDGMHSQMCGNALRCSTRYCAERNH
ISQEEDFIATDDGLKWVSAADGRIRVALGHGREFRRVEEDRWFVFSGLPHLVLDVDDLDA
VDVKTRGAALRFDHELCLRLNHPEGLHVDFAHRHGDRIAIRTYEPGTEDETLACGTGVGG
TAYVAHRAWDMPFPVTVTTLGGDMTVEENGHGLVISGTTGYLFDALDR
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccctcaaactcgacaacgacacgctcgacgccgactaccacgccctgcgg
cagcggacggcgtgcgggatcgagctggaccgcgtgcggttcgccctcatgcacggcaac
gggaacacgatcctcgtcgtggacaccgtccgcagtggactgtccgaaaacgacataaat
ggggagctggcgcgtgcactgtgccggagcttcaccgcgatcagggtggacgggatcgcc
ttcctctcgaccgcgtccagacccgtgcggatgacctacttcgaaggcgacggaatgcat
tcccagatgtgcgggaacgcgttgcggtgctcgacgcgctactgcgccgaacggaaccac
atcagccaggaggaagatttcatcgccaccgacgacggcctcaaatgggtgtcggccgcc
gacggccggatcagggtcgcgctcgggcacggacgcgagttccgccgcgtcgaggaggac
cggtggttcgtcttcagcgggctgccgcacctcgtcctcgacgtcgacgacctcgacgcg
gtcgacgtcaagacccgtggcgcggcactgcgcttcgaccacgagctctgcctccgcctc
aaccaccccgaaggactgcacgtcgacttcgcgcaccggcacggcgaccggatcgccatc
cgcacctacgagccggggaccgaggacgagaccctcgcctgcggcaccggggtcggcggc
acggcctacgtcgcgcaccgcgcgtgggacatgccgttcccggtcacggtcaccacgctg
ggcggcgacatgaccgtcgaggagaacggccacgggctcgtcatcagcggcaccaccggc
tacctcttcgacgcactcgaccgatag
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