Amycolatopsis sp. CA-230715: HUW46_07582
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Entry
HUW46_07582 CDS
T10444
Symbol
degA_3
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
amyz Amycolatopsis sp. CA-230715
Brite
KEGG Orthology (KO) [BR:
amyz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amyz03000
]
HUW46_07582 (degA_3)
Transcription factors [BR:
amyz03000
]
Prokaryotic type
Helix-turn-helix
LacI family
HUW46_07582 (degA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_31
HTH_3
HTH_IclR
HTH_38
Sigma54_DBD
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QWF84138
UniProt:
A0A975N6I3
LinkDB
All DBs
Position
8103785..8104876
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AA seq
363 aa
AA seq
DB search
MSTPGRELCEYGLVNGEKREQGSGRPRRATLAQVAKLSGYHVSTVSRVLNGSTVPGARSA
SAVAAELIRQVAREVGYLPNAAASGLRRQQTRLLGVVMARLVDTVLATIYEGIEHAARDN
GFHSLVMNSWDDDDTRRTCVEALLSHNVDAMILGDSPVDGGSLDLLVARQVPFVLVNRSV
AGYPSITCDDRAGGRLAAEHLLELGHRRVAVLAGLSYASNAIERTEGFLEAFRAAGHPVP
AERVVPSTFDVAGGRLGAERLLRTESVPTAIFTVSDPAALGVLGCLRDHGIAPGTGISVV
GFNDVPMAAELPCPLTTVRSPMRRIGEESVRQLLALMRGEEVRDVRFPPELVARATTAPV
SVP
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
gtgtcaacccccggccgggagctgtgcgaatatggcctggtgaacggggaaaagcgggag
caggggagcggcagaccgcggcgggcgacgctggcgcaggtcgccaagctcagcggctac
cacgtctcgacggtgtcccgtgtgctcaacgggtcgaccgtgcccggcgcgcgatccgcc
tccgccgtggccgccgagttgatccgccaggtcgccagggaggtcggctacctgcccaac
gccgcggcgagcggcctgcgcaggcagcagacccgcctgctcggggtggtcatggccagg
ctcgtcgacaccgtgctcgccaccatctacgaagggatcgagcacgcggcgcgggacaac
gggttccattcgctcgtgatgaactcgtgggacgacgacgacaccaggcgcacgtgcgtc
gaagcgctgctttcgcacaacgtggacgccatgatcctcggcgattccccggtcgacggc
ggctcgctcgacctgctcgtcgcacggcaggtgccgttcgtcctggtcaaccggtcggtc
gcggggtacccgtcgatcacgtgcgacgaccgcgcgggtggcaggctcgccgccgagcac
ctgctcgaactcggccaccgccgcgtcgccgtgctcgccggcctgtcgtacgcgagcaac
gcgatcgagcgcaccgagggatttctcgaagcgttccgcgccgcggggcatccggtgccc
gcggagcgggtcgtgccgagcaccttcgacgtcgcgggcggacgcctcggcgcggaacgg
ttgctgcgcaccgaatccgtgccgaccgcgatcttcaccgtgagcgatcccgcggcgctc
ggtgtcctcggctgcctgcgcgaccacgggatcgcgccgggcaccgggatttccgtcgtc
gggttcaacgacgtgccgatggccgccgaactgccgtgcccgctgaccaccgtgcggtcg
ccgatgcgcaggatcggtgaggagagcgtgcgccagttgctcgcgctgatgcgcggggaa
gaggtgcgcgacgtgcggttccccccggaactggtggcgagggcgacgaccgccccggtc
tcggtgccctag
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